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Protein Overview: Aly-PA

General Information:
Name(s) found: Aly-PA / FBpp0081156 [FlyBase]
Description(s) found:
Found 23 descriptions.
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  • The gene Aly is referred to in FlyBase by the symbol Dmel\Aly (CG1101, FBgn0010774). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:2903618..2906126. It has the cytological map location 84B2. Based on sequence similarity, it is predicted to have molecular function</span>: transcription coactivator activity; mRNA binding. The biological processes in which it is involved are not known. 6 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 266 amino acids

    Gene Ontology:
    Cellular Component: nuclear membrane [IDA]
    catalytic step 2 spliceosome [IDA]
    precatalytic spliceosome [IDA]
    nucleoplasm [IDA]
    Biological Process: nuclear mRNA splicing, via spliceosome [IC]
    Molecular Function: nucleic acid binding [IEA]
    nucleotide binding [IEA]
    transcription coactivator activity [ISS]
    mRNA binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVDKIEMSLD DIIKSTRSQK KPQAARGGPG GARKTGGQQR FAGGARRGGA NAGGSPRKPG  60
   61 SVLKGPRGGV AAGAVQKAKF PRGDVNSAWK HDMYDGPKRG AVGGGSGPTR LIVGNLDYGV 120
  121 SNTDIKELFN DFGPIKKAAV HYDRSGRSLG TADVIFERRA DALKAIKQYH GVPLDGRPMT 180
  181 IQLAVSDVAV LTRPVAATDV KRRVGGTAPT SFKRGGGQAG GTARRGFKRP VGGKPAAGGQ 240
  241 RRERKAPPTA EELDAELDSY INDMKI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..191] PSI-BLAST 17.69897 No description for 2f3jA was found.
    2 View Details [192..266] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle