Protein Overview: CG9804-PA

General Information:
Name(s) found:	CG9804-PA / FBpp0078583 [FlyBase]
Description(s) found: Found 26 descriptions. SHOW ALL	This gene is referred to in FlyBase by the symbol Dmel\CG9804 (CG9804, FBgn0037251). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:261944..263051. It has the cytological map location 82B1. Based on sequence similarity, it is predicted to have molecular function</span>: lipoate-protein ligase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: protein modification process; lipoate biosynthetic process. 6 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
Organism:	Drosophila melanogaster
Length:	234 amino acids
Gene Ontology:
Cellular Component:	cytoplasm [IEA]
Biological Process:	protein modification process [IEA] lipoate biosynthetic process [IEA]
Molecular Function:	octanoyltransferase activity [IEA] lipoate-protein ligase activity [ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPFVRPLVTV VRAGRHSYSA GLQLQQRLAR SNQILNPPAE FRNYLVLQEH DPVYTVGLRT  60
   61 KDYTAQDEDR LRRLGADFHR TDRGGLITFH GPGQLVAYPI LHLGQFVPSI RWYVATLERM 120
  121 VVEACHQMGI SSAKATKDTG IWVGDNKICA IGIHGSRYVT THGIGLNCCT DLQWFEHIVP 180
  181 CGIEGKGVTS LSKELDRHFP VEEASGALLN SFAKVFECRL QEHAKKPASS AEIG

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

[View Search in the YRC Public Image Repository]

Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

Term	Confidence	Notes
aminoacyl-tRNA ligase activity	4.025601351766	bayes_pls_golite062009
ligase activity, forming carbon-oxygen bonds	4.02412423650651	bayes_pls_golite062009
ligase activity, forming aminoacyl-tRNA and related compounds	4.02412423650651	bayes_pls_golite062009
ligase activity	3.51191116674556	bayes_pls_golite062009
catalytic activity	1.99372273395202	bayes_pls_golite062009
phenylalanine-tRNA ligase activity	0.91205340076545	bayes_pls_golite062009
binding	0.521863822270226	bayes_pls_golite062009
serine-tRNA ligase activity	0.410923263101581	bayes_pls_golite062009
glycine-tRNA ligase activity	0.25613083187245	bayes_pls_golite062009
ATP binding	0.18403217430648	bayes_pls_golite062009
adenyl ribonucleotide binding	0.145955341735342	bayes_pls_golite062009
threonine-tRNA ligase activity	0.133891091298639	bayes_pls_golite062009
adenyl nucleotide binding	0.127823774098159	bayes_pls_golite062009
protein binding	0.0101455326199739	bayes_pls_golite062009

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.85

Source: Reynolds et al. (2008)

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..234]	PSI-BLAST	46.522879	Title withheld

Protein Overview: CG9804-PA

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: