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Protein Overview: asf1-PB, asf1-PA

General Information:
Name(s) found: asf1-PB / FBpp0291576 [FlyBase]
asf1-PA / FBpp0074715 [FlyBase]
Description(s) found:
Found 55 descriptions.
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  • The gene anti-silencing factor 1 is referred to in FlyBase by the symbol Dmel\asf1 (CG9383, FBgn0029094). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:19611965..19613498. It has the cytological map location 76B9. There is experimental evidence that it has the molecular function</span>: protein binding. There is experimental evidence that it is involved in the biological process</span>: chromatin organization; regulation of nuclear mRNA splicing, via spliceosome; dendrite morphogenesis; muscle organ development; regulation of cell cycle; nucleosome assembly. 9 alleles are reported. The phenotypes of these alleles are annotated with: larval salivary gland; eye; macrochaeta. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • The gene anti-silencing factor 1 is referred to in FlyBase by the symbol Dmel\asf1 (CG9383, FBgn0029094). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:19611965..19613498. It has the cytological map location 76B9. There is experimental evidence that it has the molecular function</span>: protein binding. There is experimental evidence that it is involved in the biological process</span>: chromatin organization; regulation of nuclear mRNA splicing, via spliceosome; dendrite morphogenesis; muscle organ development; regulation of cell cycle; nucleosome assembly. 9 alleles are reported. The phenotypes of these alleles are annotated with: larval salivary gland; eye; macrochaeta. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 218 amino acids

    Gene Ontology:
    Cellular Component: chromatin assembly complex [ISS]
    RCAF complex [IDA]
    Biological Process: muscle organ development [IMP]
    regulation of nuclear mRNA splicing, via spliceosome [IMP]
    regulation of cell cycle [IMP]
    chromatin organization [IDA][IGI]
    nucleosome assembly [IMP]
    dendrite morphogenesis [IMP]
    Molecular Function: protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKVHITNVV VLDNPSSFFN PFQFELTFEC IEELKEDLEW KMIYVGSAES EEHDQVLDTI  60
   61 YVGPVPEGRH IFVFQADPPD VSKIPEPDAV GVTIVLLTCS YRGQEFVRVG YYVNNDYADP 120
  121 EMRENPPTKP LFEKLTRNIL ASKPRVTRFK INWDYGHING NGNGVENGHQ DEMATDGPST 180
  181 SEAASAVIHP EDDNSLAMPM ENGIKALNEN SNSLAMEC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..218] PSI-BLAST 76.30103 No description for 2io5A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • histone binding
    		•  4.79132023578789 bayes_pls_golite062009
  • binding
    		•  2.53764463034371 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.5158947712633 bayes_pls_golite062009
  • protein binding
    		•  2.37105076370775 bayes_pls_golite062009
  • chromatin binding
    		•  0.27260556482582 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle