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Protein Overview: CG5931-PA

General Information:
Name(s) found: CG5931-PA / FBpp0075282 [FlyBase]
Description(s) found:
Found 22 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG5931 (CG5931, FBgn0036548). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:15953908..15960956. It has the cytological map location 72C1. Based on sequence similarity, it is predicted to have molecular function</span>: ATP-dependent RNA helicase activity; RNA helicase activity. There is experimental evidence that it is involved in the biological process</span>: regulation of alternative nuclear mRNA splicing, via spliceosome. 6 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 2142 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IC]
    catalytic step 2 spliceosome [IDA]
    precatalytic spliceosome [IDA]
    U5 snRNP [ISS]
    spliceosomal complex [ISS]
    small nuclear ribonucleoprotein complex [ISS]
    Biological Process: RNA splicing [ISS]
    regulation of alternative nuclear mRNA splicing, via spliceosome [IMP]
    nuclear mRNA splicing, via spliceosome [IC]
    Molecular Function: nucleic acid binding [IEA]
    ATP binding [IEA]
    RNA helicase activity [ISS]
    ATP-dependent RNA helicase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADAAARQLQ YEYKANSNLV LQADVRLIER PRRDEATGEV CSLVGKLDGT RMGDRYQRTK  60
   61 PEKTEERKVK RQKRDEAQYD FERMKGATLL SEGIDEMVGI VYRPKTQETR QTYEVLLSFI 120
  121 QEALGDQPRD ILCGAADEIL AVLKNDRLKD RERKKDIDSL LGAVTDERFA LLVNLGKKIT 180
  181 DFGSDAVNAL TAAPNNEEQI DETYGINVQF EESEEESDND MYGEIRDDDA QDEGEEARID 240
  241 HTLHAENLAN EEAANNVKKE RSLHPLDIDA YWLQRCLSKF YKDAMVSQSK AADVLKILKD 300
  301 AADDRDCENQ LVLLLGYDCF DFIKQLKLNR QMVLYCTMLA SAQTDSERQR IREKMRGNSA 360
  361 LAKILRQLDT GKSEDQEEGE ARGSKRGKGD AEDGGAAAAG QVAGVRQLLE LEEMAFTQGS 420
  421 HFMANKRCQL PDGSYRKQRK GYEEVHVPAL KPVPFDANEE LQPVDKLPKY VQPVFEGFKT 480
  481 LNRIQSRLYK AALDSDENML LCAPTGAGKT NVALLTMMRE IGKHINEDGT INAQDFKIIY 540
  541 VAPMKSLVQE MVGNFGRRLA CYNLTVSELT GDHQLTREQI AATQVIVCTP EKWDIITRKG 600
  601 GERTFVSLVR LVIIDEIHLL HDERGPVLEA LVARTIRNIE TTQEEVRLVG LSATLPNYQD 660
  661 VATFLRVKPD KGLFYFDNSY RPVSLEQQYI GVTEKKALKR FQVMNEIVYE KTMEHAGRNQ 720
  721 VLVFVHSRKE TGKTARAVRD MCLEQDTLGS FLKEGSASME VLRTEAEQVK NTELKELLPY 780
  781 GFAIHHAGMT RVDRTLVEDL FADRHIQVLV STATLAWGVN LPAHTVIIKG TQVYNPEKGR 840
  841 WVELSALDVL QMLGRAGRPQ YDTKGEGILI TNHSELQFYL SLLNQQLPIE SQFISKLPDM 900
  901 LNAEIVLGTV QHLQDAVNWL GYTYLYIRML RNPTLYGVSH DAIKADPLLE QHRADLLHTA 960
  961 ACCLERSGLI KYDRKTGHFQ VTDLGRIASH YYLTHETMLT YNQLLKQTLS EIELFRVFSL1020
 1021 SSEFRHISVR EEEKLELQKL MERVPIPIKE SIEEHSAKVN VLLQAYISQL KLEGFALMSD1080
 1081 MVFITQSAAR LMRAIFEIVL TRGWAQLADK TLTLCKMIDR RMWQSMTPLR QFKKMPDEIA1140
 1141 KKLEKKHFPW GRLYDLEPHE LGELIRVPKL GKTIHKFVHQ FPKLELSTHI QPITRGTLRV1200
 1201 ELTITPDFQW DEKVHGQSEG FWVLIEDVDS ELILHHEFFL LKQKYSQDEH QLKFFVPVFE1260
 1261 PLPPQYFLRI VSDRWIGAET QLPVSFRHLI LPEKNMPPTE LLDLQPLPIS ALRQPKFESF1320
 1321 YSQRFPQFNP IQTQVFNAVY NSDENVFVGA PTGSGKMTIA EFAIMRLFTT QSDARCVYLV1380
 1381 SEEALADLVF ADWHSKFGSL DIKVVKLTGE TGTDLKLIAK GQLVITTADK WDVLSRRWKQ1440
 1441 RKNVQLVNLF IVDELQLVGG EEGPVLEIVC SRMRYISSQI EKQIRIVALS ASLTDARDVA1500
 1501 QWLGCNPNAT FNFHPSVRPI PLELHIQGYN VTHNATRIAT MSKPVYNAIL KYSAHKPVIV1560
 1561 FVSSRKQARL TAIDVLTYAA SDLQPNRFFH AEEEDIKPFL ERMTDKTLKE TLAQGVAYLH1620
 1621 EGLSASDHRL VEQLFDSGAV QVAVISRDLC WGMSISAHLV IIMDTQFYNG KNHSYEDYPI1680
 1681 TDVLQMIGRA NRPNEDADAK CVLMCQSSKK DFFKKFINEP LPIESHLDHR MHDHFNAEVV1740
 1741 TKTIENKQDA VDYLTWTFLY RRLTQNPNYY NLQGVTHRHL SDHLSELVEN TLSDLEQSKC1800
 1801 ISVEDDMDTL PLNLGMIAAY YYINYTTIEL FSLSLNSKTK VRGLLEIISS AAEYEDVVVR1860
 1861 HHEEQVLRTL SQRLPNKLTG PNETAPKFND PHIKTNLLLQ AHLSRLQLGP ELQGDTEQIL1920
 1921 SKAIRLIQAC VDVLSSNGWL SPAVAAMELA QMVTQAMWSK DSYLKQLPHF SPEIVKRCTE1980
 1981 KKIETVFDIM ELEDEDRTRL LQLSDLQMAD VARFCNRYPN IELNYEVVDK DRINSGSTVN2040
 2041 VVVQLEREDE VTGPVIAPFF PQKREEGWWV VIGDPKTNSL LSIKRLTLQQ KAKVKLDFVA2100
 2101 PSPGKHDYTL YYMSDSYLGC DQEYKFSIEV GDFQSESESE SD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle