Description(s) found:
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gi|28573624|ref|NP_476864.2| retained, isoform A [Drosophila melanogaster]
[NCBI NR]
gi|28380673|gb|AAF47037.3| retained, isoform A [Drosophila melanogaster]
[NCBI NR]
The gene retained is referred to in FlyBase by the symbol Dmel\retn (CG5403, FBgn0004795). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:19520135..19542343. It has the cytological map location 59F5. There is experimental evidence that it has the molecular function</span>: transcription activator activity; SUMO binding; DNA binding. There is experimental evidence that it is involved in the biological process</span>: axon guidance; embryonic pattern specification; gliogenesis; muscle organ development; oogenesis; positive regulation of transcription; anterior/posterior pattern formation; male courtship behavior; regulation of female receptivity. 23 alleles are reported. The phenotypes of these alleles are annotated with: embryonic hindgut; embryonic glial cell; adult mushroom body; interface glial cell; longitudinal connective; mushroom body beta-lobe; axon; embryonic/larval somatic muscle. It has 2 annotated transcripts and 2 annotated polypeptides.
[FlyBase]
>CG5403-PA translation from_gene[CG5403 retn FBgn0004795] seq_release:3 mol_weight=96783 cds_boundaries:(2R:18,676,746..18,697,383[+]) aa_length:906 transcript_info:[CG5403-RA seq_release:3] gene_info:[gene symbol:retn FBgn0004795 gene_boundaries:(2R:1
[hmr_yeast5_DM3-1_pombe.fasta]
CG5403-PA, isoform A [Drosophila melanogaster]gi|28573624|ref|NP_476864.2| CG5403-PA [Drosophila melanogaster]
[nrdb_11152004_Chlamydomonas]
type=protein; loc=2R:join(19520701..19520787,19529762..19529928,19530007..19530157,19530282..19530618,19530695..19530795,19535212..19535284,19538424..19538607,19538958..19539105,19539183..19539676,19540026..19540124,19540280..19540803,19540986..19541341);
[fly-100309-contam.fasta]
CG5403-PA, isoform A [Drosophila melanogaster]
[nr-271106-contam.fasta]
retained CG5403-PA, isoform A [Drosophila melanogaster]
[nr-271106-contam.fasta]
type=protein; loc=2R:join(19520701..19520787,19529762..19529928,19530007..19530157,19530282..19530618,19530695..19530795,19535212..19535284,19538424..19538607,19538958..19539105,19539183..19539676,19540026..19540124,19540280..19540803,19540986..19541341); ID=FBpp0071981; name=retn-PA; parent=FBgn0004795,FBtr0072072; dbxref=FlyBase:FBpp0071981,FlyBase_Annotation_IDs:CG5403-PA,GB_protein:AAF47037.3,REFSEQ:NP_476864,GB_protein:AAF47037; MD5=1650ea9e8c4bc7b60e068d250045885f; length=906; release=r5.16; species=Dmel;
[fly-contam-His-TEV-Tub4complex.fasta]
type=protein; loc=2R:join(19520701..19520787,19529762..19529928,19530007..19530157,19530282..19530618,19530695..19530795,19535212..19535284,19538424..19538607,19538958..19539105,19539183..19539676,19540026..19540124,19540280..19540803,19540986..19541341); ID=FBpp0071981; name=retn-PA; parent=FBgn0004795,FBtr0072072; dbxref=FlyBase:FBpp0071981,FlyBase_Annotation_IDs:CG5403-PA,GB_protein:AAF47037.3,REFSEQ:NP_476864,GB_protein:AAF47037; MD5=1650ea9e8c4bc7b60e068d250045885f; length=906; release=r5.21; species=Dmel;
[Other_drosophila_na_09-09-2009_reversed.fasta]
Isoform A of Protein dead ringer OS=Drosophila melanogaster GN=retn
[UniProt_drosophila_07-01-2011_reversed.fasta]
type=protein; loc=2R:join(19520701..19520787,19529762..19529928,19530007..19530157,19530282..19530618,19530695..19530795,19535212..19535284,19538424..19538607,19538958..19539105,19539183..19539676,19540026..19540124,19540280..19540803,19540986..19541341); ID=FBpp0071981; name=retn-PA; parent=FBgn0004795,FBtr0072072; dbxref=FlyBase:FBpp0071981,FlyBase_Annotation_IDs:CG5403-PA,GB_protein:AAF47037.3,REFSEQ:NP_476864,GB_protein:AAF47037,FlyMine:FBpp0071981,modMine:FBpp0071981; MD5=1650ea9e8c4bc7b60e068d250045885f; length=906; release=r5.46; species=Dmel;
[fly-062812-sfps-sandra-contam.fasta]
type=protein; loc=2R:join(23633178..23633264,23642239..23642405,23642484..23642634,23642759..23643095,23643172..23643272,23647689..23647761,23650901..23651084,23651435..23651582,23651660..23652153,23652503..23652601,23652757..23653280,23653463..23653818); ID=FBpp0071981; name=retn-PA; parent=FBgn0004795,FBtr0072072; dbxref=FlyBase:FBpp0071981,FlyBase_Annotation_IDs:CG5403-PA,GB_protein:AAF47037.3,REFSEQ:NP_476864,GB_protein:AAF47037,FlyMine:FBpp0071981,modMine:FBpp0071981; MD5=1650ea9e8c4bc7b60e068d250045885f; length=906; release=r6.02; species=Dmel;
[fly-2014-05-contam.fasta]
type=protein; loc=2R:join(23633178..23633264,23642239..23642405,23642484..23642634,23642759..23643095,23643172..23643272,23647689..23647761,23650901..23651084,23651435..23651582,23651660..23652153,23652503..23652601,23652757..23653280,23653463..23653818); ID=FBpp0071981; name=retn-PA; parent=FBgn0004795,FBtr0072072; dbxref=FlyBase:FBpp0071981,FlyBase_Annotation_IDs:CG5403-PA,GB_protein:AAF47037.3,REFSEQ:NP_476864,GB_protein:AAF47037,FlyMine:FBpp0071981,modMine:FBpp0071981; MD5=1650ea9e8c4bc7b60e068d250045885f; length=906; release=r6.07; species=Dmel;
[fly-08202015-contam.fasta]
Isoform of Q24573, Isoform A of Protein dead ringer OS=Drosophila melanogaster GN=retn
[DROME.fasta.20160308]
FBpp0071981 type=protein; loc=2R:join(23633178..23633264,23642239..23642405,23642484..23642634,23642759..23643095,23643172..23643272,23647689..23647761,23650901..23651084,23651435..23651582,23651660..23652153,23652503..23652601,23652757..23653280,23653463..23653818); ID=FBpp0071981; name=retn-PA; parent=FBgn0004795,FBtr0072072; dbxref=FlyBase:FBpp0071981,FlyBase_Annotation_IDs:CG5403-PA,GB_protein:AAF47037.3,REFSEQ:NP_476864,GB_protein:AAF47037,FlyMine:FBpp0071981,modMine:FBpp0071981; MD5=1650ea9e8c4bc7b60e068d250045885f; length=906; release=r6.09; species=Dmel;
[dmel-all-translation-r6.09.fasta]
[fly-122215-dmel-6-09-contam.fasta]
type=protein; loc=2R:join(23633178..23633264,23642239..23642405,23642484..23642634,23642759..23643095,23643172..23643272,23647689..23647761,23650901..23651084,23651435..23651582,23651660..23652153,23652503..23652601,23652757..23653280,23653463..23653818); ID=FBpp0071981; name=retn-PA; parent=FBgn0004795,FBtr0072072; dbxref=FlyBase:FBpp0071981,FlyBase_Annotation_IDs:CG5403-PA,GB_protein:AAF47037.3,REFSEQ:NP_476864,GB_protein:AAF47037,FlyMine:FBpp0071981,modMine:FBpp0071981; MD5=1650ea9e8c4bc7b60e068d250045885f; length=906; release=r6.14; species=Dmel;
[fly-dmel-jan2017-sandracontam.fasta]
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