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Protein Overview: mRpS29-PA

General Information:
Name(s) found: mRpS29-PA / FBpp0071753 [FlyBase]
Description(s) found:
Found 22 descriptions.
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  • The gene mitochondrial ribosomal protein S29 is referred to in FlyBase by the symbol Dmel\mRpS29 (CG3633, FBgn0034727). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:18306442..18307876. It has the cytological map location 58E1. Based on sequence similarity, it is predicted to have molecular function</span>: structural constituent of ribosome. Based on sequence similarity, it is predicted to be involved in the biological process</span>: translation. 6 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 392 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial small ribosomal subunit [ISS]
    Biological Process: apoptosis [IEA]
    translation [ISS]
    Molecular Function: structural constituent of ribosome [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMIRNRFGS LSRVSAQLQR HVQQMSTNAA ASPAEGATIS EFRTAVSNPG EHSAMQVAKF  60
   61 YTIPAEQKKQ IFTGGGLPKQ YEQQIKTFTE ACLMVRNPAL ELLQYIKDGD LTKPVVRYVL 120
  121 YGENGTGKTL TMAHVLHYGA LNDFLLVHVP WAPNWMKRPK EASNAAGQEG MIDLPFDAAA 180
  181 WLVHFKTQNG PLLQRLQLKT SKEYVWSKRE STPAGSSLIE LVEHGIARIK YASETTAALI 240
  241 AELKQLSTAG QCKVMVAIDG FNAFFHPVTR IFSDNKQLVT PDRVTLTQPF LDITNYDWTN 300
  301 GVCILSVDKI AMTEGHMDSY MPRYLLGKEG FEHLDPFVPI HVENYTDKEF HSYISYYLDR 360
  361 HWINKTPQGF EEQLKFMSNK NPYSLMQLVK AL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..86] MSA 1.03898 View MSA. No confident structure predictions are available.
    2 View Details [87..392] FFAS03 1.15 Crystal structure of (13814777) from SULFOLOBUS SOLFATARICUS at 2.00 A resolution

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • structural constituent of ribosome
    		•  5.42139550243577 bayes_pls_golite062009
  • structural molecule activity
    		•  4.52418150951371 bayes_pls_golite062009
  • binding
    		•  2.15223415484989 bayes_pls_golite062009
  • protein binding
    		•  1.25232424749674 bayes_pls_golite062009
  • catalytic activity
    		•  0.942640875796745 bayes_pls_golite062009
  • motor activity
    		•  0.934327429601554 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.88509145478589 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  0.482433345604081 bayes_pls_golite062009
  • microtubule motor activity
    		•  0.381564091226657 bayes_pls_golite062009
  • DNA binding
    		•  0.368768953337555 bayes_pls_golite062009
  • purine nucleotide binding
    		•  0.354154818458687 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  0.35085688811866 bayes_pls_golite062009
  • ribonucleotide binding
    		•  0.350844329183388 bayes_pls_golite062009
  • nucleotide binding
    		•  0.350227693353399 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.181434122054025 bayes_pls_golite062009
  • translation regulator activity
    		•  0.165004576559811 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
    		•  0.144513585153713 bayes_pls_golite062009
  • RNA binding
    		•  0.10404338295854 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.82

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle