| Protein: | mRpS29-PA |
| Organism: | Drosophila melanogaster |
| Length: | 392 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mRpS29-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
508.0 | [0..1] | [392..7] |
|
Region A: Residues: [1-86] |
1 11 21 31 41 51
| | | | | |
1 MKMIRNRFGS LSRVSAQLQR HVQQMSTNAA ASPAEGATIS EFRTAVSNPG EHSAMQVAKF 60
61 YTIPAEQKKQ IFTGGGLPKQ YEQQIK
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [87-392] |
1 11 21 31 41 51
| | | | | |
1 TFTEACLMVR NPALELLQYI KDGDLTKPVV RYVLYGENGT GKTLTMAHVL HYGALNDFLL 60
61 VHVPWAPNWM KRPKEASNAA GQEGMIDLPF DAAAWLVHFK TQNGPLLQRL QLKTSKEYVW 120
121 SKRESTPAGS SLIELVEHGI ARIKYASETT AALIAELKQL STAGQCKVMV AIDGFNAFFH 180
181 PVTRIFSDNK QLVTPDRVTL TQPFLDITNY DWTNGVCILS VDKIAMTEGH MDSYMPRYLL 240
241 GKEGFEHLDP FVPIHVENYT DKEFHSYISY YLDRHWINKT PQGFEEQLKF MSNKNPYSLM 300
301 QLVKAL
|
| Detection Method: | |
| Confidence: | 1.15 |
| Match: | 2fnaA |
| Description: | Crystal structure of (13814777) from SULFOLOBUS SOLFATARICUS at 2.00 A resolution |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| structural constituent of ribosome | 5.42139550243577 | bayes_pls_golite062009 |
| structural molecule activity | 4.52418150951371 | bayes_pls_golite062009 |
| binding | 2.15223415484989 | bayes_pls_golite062009 |
| protein binding | 1.25232424749674 | bayes_pls_golite062009 |
| catalytic activity | 0.942640875796745 | bayes_pls_golite062009 |
| motor activity | 0.934327429601554 | bayes_pls_golite062009 |
| nucleic acid binding | 0.88509145478589 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.482433345604081 | bayes_pls_golite062009 |
| microtubule motor activity | 0.381564091226657 | bayes_pls_golite062009 |
| DNA binding | 0.368768953337555 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.354154818458687 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.35085688811866 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.350844329183388 | bayes_pls_golite062009 |
| nucleotide binding | 0.350227693353399 | bayes_pls_golite062009 |
| transcription regulator activity | 0.181434122054025 | bayes_pls_golite062009 |
| translation regulator activity | 0.165004576559811 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 0.144513585153713 | bayes_pls_golite062009 |
| RNA binding | 0.10404338295854 | bayes_pls_golite062009 |
