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Protein Overview: CG5009-PA

General Information:
Name(s) found: CG5009-PA / FBpp0088517 [FlyBase]
Description(s) found:
Found 23 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG5009 (CG5009, FBgn0027572). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:13648438..13652065. It has the cytological map location 54E8. Based on sequence similarity, it is predicted to have molecular function</span>: palmitoyl-CoA oxidase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: oxidation reduction; fatty acid beta-oxidation. 4 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 669 amino acids

    Gene Ontology:
    Cellular Component: peroxisome [IEA]
    Biological Process: fatty acid beta-oxidation [IEA]
    oxidation reduction [IEA]
    Molecular Function: acyl-CoA dehydrogenase activity [IEA]
    FAD binding [IEA]
    palmitoyl-CoA oxidase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAKPVNPDL QKERSTATFN PREFSVLWAG GEERFKEKKA LEKLFLEDPA LQDDLPISYL  60
   61 SHKELYEHSL RKACIIGEKI RKLRADGEDG VDTYNALLGG SLGSAILKEG NPLALHYVMF 120
  121 VPTIMGQGTM DQQVEWLSKA WDCEIIGTYA QTELGHGTFL RGLETRADYD ASTQEFVINT 180
  181 PSLSAYKWWP GGLGHTANHA VVVAQLYTKG EFRGLAPFIV QLRDSDTHRP MPGIDIGDIG 240
  241 TKLGMKGVNN GYLGLKNVRV PLNNMLMKNQ QVLPDGTYVA PKNSVLTYGT MMFVRCALIR 300
  301 DTAQSLAKAS TIATRYSAVR RQSPIDPNQP EPQIMDHTTQ QLKLFPQIAK AIVFKTTGDG 360
  361 IWNMYNVISG EIEQGNLDRL PEMHALSCCL KAICSADAAA GVETCRLSCG GHGYMDCSNF 420
  421 PTIYGMTTAV CTYEGENTVM LLQTARYLVK VYGQALNGEK LVPTVSYISD AINQTKFVNF 480
  481 DGSLRSIVKA FQFVAANKTR IAYEQIELRR KQGYGTEVAA NLCGTFLTAA ADLHGRAFLA 540
  541 QTAYTELLAL SREVSPELAE VLKVVLELYL VDACLNRIGD FLRFIDLTDQ DVTKLEVRLE 600
  601 NCLKRFRPNA VSLVDSFDLH DRVLDSALGA YDGNVYEHIF ESTKKNPLNK EPVNGAFHKY 660
  661 LKPFMKAHL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..669] PSI-BLAST 162.0 Peroxisomal acyl-CoA oxidase-II, domains 3 and 4; Peroxisomal acyl-CoA oxidase-II, domains 1 and 2

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • acyl-CoA oxidase activity
    		•  7.85164875699474 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors
    		•  7.69964776555327 bayes_pls_golite062009
  • acyl-CoA dehydrogenase activity
    		•  6.0252876667118 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
    		•  5.50948952617422 bayes_pls_golite062009
  • palmitoyl-CoA oxidase activity
    		•  5.41720462605663 bayes_pls_golite062009
  • oxidoreductase activity
    		•  3.99827953439804 bayes_pls_golite062009
  • catalytic activity
    		•  2.41506805547596 bayes_pls_golite062009
  • pristanoyl-CoA oxidase activity
    		•  2.26651221125135 bayes_pls_golite062009
  • long-chain-acyl-CoA dehydrogenase activity
    		•  0.13696326544237 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle