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Protein Overview: CG4966-PB

General Information:
Name(s) found: CG4966-PB / FBpp0086016 [FlyBase]
Description(s) found:
Found 20 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG4966 (CG4966, FBgn0034261). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:13571102..13578327. It has the cytological map location 54D5. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: odorant binding; thymidylate synthase (FAD) activity; FAD binding. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: transport; dTMP biosynthetic process. 5 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 834 amino acids

    Gene Ontology:
    Cellular Component: late endosome membrane [IDA]
    lysosomal membrane [IDA]
    Biological Process: dTMP biosynthetic process [IEA]
    miRNA loading onto RISC involved in gene silencing by miRNA [IMP]
    negative regulation of gene silencing by RNA [IMP]
    transport [IEA]
    siRNA loading onto RISC involved in chromatin silencing by small RNA [IMP]
    Molecular Function: odorant binding [IEA]
    FAD binding [IEA]
    thymidylate synthase (FAD) activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAKETMIVF VYDTECLTDE ADDPISAVLY FHPSWVSDSQ KVALCGQLMG TSYFLKDCFF  60
   61 NPRILALQNG KFVLKEFGRF ILAIGTDRNI GDQLLEHRAD LLSSLLKFFH RDVQTLYAQY 120
  121 AAPPALNRRN LSEKLYHIFE TYLPMLQRNG NTFQNVPRLR MPKTASHIFL EAIQTLQSCQ 180
  181 QTKGILGGAI LYHNKVVASQ LSDMVTKHLV LTDPLHIRTA AEQVTNHPEF HIPNGVQMLV 240
  241 VYLEHMQYRQ LAGEAQRAQN LQMNTAQLTQ NGMPFQYAKR KIKRDKSLIF THIPEEEHAP 300
  301 EQQGAVEQLP PARPKSMRPT HLPLRIKSMQ SKELPESGIA SINFDETDSY PQFIGRTSVC 360
  361 NTPMTENKVL PVANVMSICA NPEDEGKEED IHNSNGKTHS RRNSLKVDVE KFFQNFISNP 420
  421 NKQLTRRKSS ADLQDALRAI SKKLNNFTHG LKTDVNRNGS GNGDVSSDSP DFIEDDDKIT 480
  481 SRTISDPTYP VFNTNGQQIS RSLFQQFLDQ YRKLWGVASE QAHEDAELAA LVAEFQEFNA 540
  541 EIQKLDEHMR QQAAEASSAD RNLNVSAAKT PLDKRSMTLP LKSAGESTFG ERASGRSGAG 600
  601 GVPLTPLMAK LSVLALSETT PIEIQTPLTT SKVFPRRSSL KCEDAVDALA ALTTAPAQPP 660
  661 GPIQPDGLQR TELYICGQQN MTLLLLMEEG TCQQQQVVQK MFDICVAKFP HMESQLNQTL 720
  721 NVNVEGDNRD GSNYSFMCVD SKWDVLQRNG PWNPLELNIL ESMHSIHSSG HHLTDLILRS 780
  781 NDSVYYGHKN GRTEFFYKEP THQINGIPPP SDPIGNIQSR AKSRLERDHS YMLF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..85] deduced N/A No confident structure predictions are available.
    2 View Details [86..200] MSA 1.014974 View MSA. No confident structure predictions are available.
    3 View Details [201..310] deduced N/A No confident structure predictions are available.
    4 View Details [311..525] deduced N/A No confident structure predictions are available.
    5 View Details [526..646] deduced N/A No confident structure predictions are available.
    6 View Details [647..834] MSA 2.009933 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle