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Protein Overview: CG3790-PA

General Information:
Name(s) found: CG3790-PA / FBpp0086928 [FlyBase]
Description(s) found:
Found 19 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG3790 (CG3790, FBgn0033778). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:8760289..8762518. It has the cytological map location 49D6. Based on sequence similarity, it is predicted to have molecular function</span>: carnitine transporter activity. The biological processes in which it is involved are not known. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 604 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEA]
    Biological Process: transmembrane transport [IEA]
    Molecular Function: carnitine transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFDEVLREV GSFGLYQKVI ICSVLLPAAL PCAFHAYSQL FIAATPQHFC RVPELEPWTQ  60
   61 DYVQLVKNLS IPRNRNGAYA ECSMYSRNYT DIVRYLEYRP PPDLLRQQAE DLLKLQPDTT 120
  121 QVVPCQHGWH YDKSIYSSTV VQEWNLVCDR SFLVTLALVV FGVGGLLGNY VFGYLVDLWG 180
  181 RRPSFYAYLL LEIIACAASA FAWNYYTWLG LRFVVGLTVP AILASPYVLA IELVGPERRV 240
  241 FCTIVSNIAY SLGLVVLAGV IYIVRDWREL SLAVSMPLLM LFSCFFVLPE SPRWLMAVGK 300
  301 TRRAIKILKV MARVNGVRVN RDFVERLQRK LVITRAAETK SSMTTHYGIL DLFRGPNMRR 360
  361 KTLIITLIWF ANTSVYVGLS YYAPALGGDE IWNFFLAGAV ELPTYLLLWP GLSYFGRRWI 420
  421 LFISMLVGGV ACVATFLYPD ITLLLYCVGK MGISSSFVVL PLMASELYPT VVRGLGMSFS 480
  481 SVISMVGPIV IPMINHMGQQ MLVLPLIVMG ALLILGGFAS LLLPETRNRN LPQTLEEGEA 540
  541 VPLSFLLCCC VESERKPNNI RASPKKRILP EAGTPVFHRV DTPVSDRVPC KIVCSICKNE 600
  601 MRTL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..103] deduced N/A No confident structure predictions are available.
    2 View Details [104..526] PSI-BLAST 26.69897 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
    3 View Details [527..604] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • substrate-specific transmembrane transporter activity
    		•  5.46247398538901 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  4.58978526526921 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  4.31967711223954 bayes_pls_golite062009
  • transporter activity
    		•  4.09176719149278 bayes_pls_golite062009
  • anion transmembrane transporter activity
    		•  3.94605227012838 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.59744164024479 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.5865018981083 bayes_pls_golite062009
  • organic anion transmembrane transporter activity
    		•  3.3413526350788 bayes_pls_golite062009
  • inorganic anion transmembrane transporter activity
    		•  3.21476253433572 bayes_pls_golite062009
  • hexose phosphate transmembrane transporter activity
    		•  2.87308506088228 bayes_pls_golite062009
  • glucose-6-phosphate transmembrane transporter activity
    		•  2.87308506088228 bayes_pls_golite062009
  • organic acid transmembrane transporter activity
    		•  2.15783210522667 bayes_pls_golite062009
  • binding
    		•  1.89539096965643 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.59419818573076 bayes_pls_golite062009
  • phosphate transmembrane transporter activity
    		•  1.47932844880848 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  1.22264637452409 bayes_pls_golite062009
  • polyol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • alcohol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • glycerol transmembrane transporter activity
    		•  0.812001619402678 bayes_pls_golite062009
  • symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • cation:sugar symporter activity
    		•  0.143419068761182 bayes_pls_golite062009
  • sugar:hydrogen symporter activity
    		•  0.143419068761182 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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