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Protein Overview: CG30043-PA

General Information:
Name(s) found: CG30043-PA / FBpp0087018 [FlyBase]
Description(s) found:
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  • gi|24652993|ref|NP_725143.1| CG30043 [Drosophila melanogaster] [NCBI NR]
  • gi|21627375|gb|AAM68674.1| CG30043 [Drosophila melanogaster] [NCBI NR]
  • gi|21064301|gb|AAM29380.1| LP07082p [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG30043 (CG30043, FBgn0050043). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:8246958..8250670. It has the cytological map location 49A1. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: peptidase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: proteolysis. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG30043-PA translation from_gene[CG30043 CG30043 FBgn0050043] seq_release:3 mol_weight=100125 cds_boundaries:(2R:7,424,213..7,427,494[+]) aa_length:878 transcript_info:[CG30043-RA seq_release:3] gene_info:[gene symbol:CG30043 synonyms:[CG13161] FBgn00 [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q8MKL0) LP07082p (CG30043-PA) [DrosMelano7227.FASTAC.txt]
  • CG30043-PA [Drosophila melanogaster]gi|21064301|gb|AAM29380.1| LP07082p [Drosophila melanogaster]gi|24652993|ref|NP_725143.1| CG30043-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:join(8247005..8247025,8247089..8247605,8247660..8247834,8247889..8247973,8248103..8248223,8248284..8248438,8248494..8248877,8248941..8249121,8249180..8249364,8249423..8249566,8249621..8250289); ID=FBpp0087018; name=CG30043-PA; parent= [fly-100309-contam.fasta]
  • CG30043-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • LP07082p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:join(8247005..8247025,8247089..8247605,8247660..8247834,8247889..8247973,8248103..8248223,8248284..8248438,8248494..8248877,8248941..8249121,8249180..8249364,8249423..8249566,8249621..8250289); ID=FBpp0087018; name=CG30043-PA; parent=FBgn0050043,FBtr0087907; dbxref=GB_protein:AAM68674.1,FlyBase:FBpp0087018,FlyBase_Annotation_IDs:CG30043-PA,REFSEQ:NP_725143,GB_protein:AAM68674; MD5=fb6294539d227d79d9e7c875c504f68b; length=878; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:join(8247005..8247025,8247089..8247605,8247660..8247834,8247889..8247973,8248103..8248223,8248284..8248438,8248494..8248877,8248941..8249121,8249180..8249364,8249423..8249566,8249621..8250289); ID=FBpp0087018; name=CG30043-PA; parent=FBgn0050043,FBtr0087907; dbxref=GB_protein:AAM68674.1,FlyBase:FBpp0087018,FlyBase_Annotation_IDs:CG30043-PA,REFSEQ:NP_725143,GB_protein:AAM68674; MD5=fb6294539d227d79d9e7c875c504f68b; length=878; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG30043 OS=Drosophila melanogaster GN=CG30041;CG30043 PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2R:join(8247005..8247025,8247089..8247605,8247660..8247834,8247889..8247973,8248103..8248223,8248284..8248438,8248494..8248877,8248941..8249121,8249180..8249364,8249423..8249566,8249621..8250289); ID=FBpp0087018; name=CG30043-PA; parent=FBgn0050043,FBtr0087907; dbxref=GB_protein:AAM68674.1,FlyBase:FBpp0087018,FlyBase_Annotation_IDs:CG30043-PA,REFSEQ:NP_725143,GB_protein:AAM68674,FlyMine:FBpp0087018,modMine:FBpp0087018; MD5=fb6294539d227d79d9e7c875c504f68b; length=878; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:join(12359500..12359520,12359584..12360100,12360155..12360329,12360384..12360468,12360598..12360718,12360779..12360933,12360989..12361372,12361436..12361616,12361675..12361859,12361918..12362061,12362116..12362784); ID=FBpp0087018; name=CG30043-PA; parent=FBgn0050043,FBtr0087907; dbxref=GB_protein:AAM68674.1,FlyBase:FBpp0087018,FlyBase_Annotation_IDs:CG30043-PA,REFSEQ:NP_725143,GB_protein:AAM68674,FlyMine:FBpp0087018,modMine:FBpp0087018; MD5=fb6294539d227d79d9e7c875c504f68b; length=878; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:join(12359500..12359520,12359584..12360100,12360155..12360329,12360384..12360468,12360598..12360718,12360779..12360933,12360989..12361372,12361436..12361616,12361675..12361859,12361918..12362061,12362116..12362784); ID=FBpp0087018; name=CG30043-PA; parent=FBgn0050043,FBtr0087907; dbxref=GB_protein:AAM68674.1,FlyBase:FBpp0087018,FlyBase_Annotation_IDs:CG30043-PA,REFSEQ:NP_725143,GB_protein:AAM68674,FlyMine:FBpp0087018,modMine:FBpp0087018; MD5=fb6294539d227d79d9e7c875c504f68b; length=878; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0087018 type=protein; loc=2R:join(12359500..12359520,12359584..12360100,12360155..12360329,12360384..12360468,12360598..12360718,12360779..12360933,12360989..12361372,12361436..12361616,12361675..12361859,12361918..12362061,12362116..12362784); ID=FBpp0087018; name=CG30043-PA; parent=FBgn0050043,FBtr0087907; dbxref=GB_protein:AAM68674.1,FlyBase:FBpp0087018,FlyBase_Annotation_IDs:CG30043-PA,REFSEQ:NP_725143,GB_protein:AAM68674,FlyMine:FBpp0087018,modMine:FBpp0087018; MD5=fb6294539d227d79d9e7c875c504f68b; length=878; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:join(12359500..12359520,12359584..12360100,12360155..12360329,12360384..12360468,12360598..12360718,12360779..12360933,12360989..12361372,12361436..12361616,12361675..12361859,12361918..12362061,12362116..12362784); ID=FBpp0087018; name=CG30043-PA; parent=FBgn0050043,FBtr0087907; dbxref=GB_protein:AAM68674.1,FlyBase:FBpp0087018,FlyBase_Annotation_IDs:CG30043-PA,REFSEQ:NP_725143,GB_protein:AAM68674,UniProt/TrEMBL:Q8MKL0,FlyMine:FBpp0087018,modMine:FBpp0087018; MD5=fb6294539d227d79d9e7c875c504f68b; length=878; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 878 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: proteolysis [IEA]
    Molecular Function: peptidase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEKTDKENP IDTELVESLS LRKGYVRRPR LSWYYAPSFL LLWLALFYAI VIPLYYRLPD  60
   61 RLTISEESHR PGEFVAERAQ QYLYTYDRIG PKVTGSYANE VTTVEFLVNE TEKIRAEMRS 120
  121 DLYDLELDVQ SPTGGYVFND MVNMYQGIHN VIVKLSSKSS QSESYLLLNS HFDSKPGSPG 180
  181 SGDDGTMVVV MMEVLRQMSI SEIPFEHPIV FLFNGAEENP LQASHGFITQ HKWAEKCKAF 240
  241 INLEVGGSGG RDLLFQSGPN NPWLMKYYRQ HAKHPFATTM AEEIFQSGVL PSDSDFRIFR 300
  301 DYGNIAGLDI AQIENGYVYH TAFDTYENVP GRSIQNSGNN VLALVRAYSN ASELYNTESD 360
  361 DSHAVFFDFL GLFFVYYTET TGIVVNCVIG VLSLVLVGCS VWRMCHQSEE ASLPQISIWF 420
  421 LSILGLHVVG FLLCICLPLL MAVLFDAGDR SLTYFTSNWL VFGLYVCPAI IGLVLPLTLY 480
  481 YTLLPNEKLS QAYQLQLSLH AHLVVQALLA LILTAMGLRS QYLCLISMIF YGGALLINLV 540
  541 STLHDRGYYW VPIVMFLQVL PFSYFCYLFY MFLVIFIPVL GRNGYSTNPD LIVGLLCGVC 600
  601 VFFALGFAAQ LINMFRWPKL ILLGLGVMTF IFCMIAVSDV GFPYRAKTNV MRANCLHTRR 660
  661 IFYEHDGSVS RSDSGYYFNY QDRRAFAPLE DSALDLTGLE PVANRCDDYV MCGIPCFYYS 720
  721 WCKWRQWDGW LPRESEVILP GELTLDFLGY TVLESGTVAR YEFELAGPPH MNLFIQPVGS 780
  781 AKVDDWSFVR KMLDEPEEFQ PPYQIFHSYG TDNTSLKFFI DMEKPDGIFD TPTLELAAVG 840
  841 HWVSFEYERD AEAKDFVAAF PDFVHVMEWP SIFKRYIF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..121] PSI-BLAST 34.69897 The 0.95 Angstrom Resolution Crystal Structure of the Aminopeptidase from Aeromonas proteolytica
    2 View Details [122..433] PSI-BLAST 30.69897 No description for 2ootA was found.
    3 View Details [434..637] MSA 12.671989 View MSA. No confident structure predictions are available.
    4 View Details [638..698] deduced N/A No confident structure predictions are available.
    5 View Details [699..878] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.462692332456305 bayes_pls_golite062009
  • hydrolase activity
    		•  0.135975510640014 bayes_pls_golite062009
  • protein binding
    		•  0.0314733407355351 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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