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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG30043-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEKTDKENP IDTELVESLS LRKGYVRRPR LSWYYAPSFL LLWLALFYAI VIPLYYRLPD  60
   61 RLTISEESHR PGEFVAERAQ QYLYTYDRIG PKVTGSYANE VTTVEFLVNE TEKIRAEMRS 120
  121 DLYDLELDVQ SPTGGYVFND MVNMYQGIHN VIVKLSSKSS QSESYLLLNS HFDSKPGSPG 180
  181 SGDDGTMVVV MMEVLRQMSI SEIPFEHPIV FLFNGAEENP LQASHGFITQ HKWAEKCKAF 240
  241 INLEVGGSGG RDLLFQSGPN NPWLMKYYRQ HAKHPFATTM AEEIFQSGVL PSDSDFRIFR 300
  301 DYGNIAGLDI AQIENGYVYH TAFDTYENVP GRSIQNSGNN VLALVRAYSN ASELYNTESD 360
  361 DSHAVFFDFL GLFFVYYTET TGIVVNCVIG VLSLVLVGCS VWRMCHQSEE ASLPQISIWF 420
  421 LSILGLHVVG FLLCICLPLL MAVLFDAGDR SLTYFTSNWL VFGLYVCPAI IGLVLPLTLY 480
  481 YTLLPNEKLS QAYQLQLSLH AHLVVQALLA LILTAMGLRS QYLCLISMIF YGGALLINLV 540
  541 STLHDRGYYW VPIVMFLQVL PFSYFCYLFY MFLVIFIPVL GRNGYSTNPD LIVGLLCGVC 600
  601 VFFALGFAAQ LINMFRWPKL ILLGLGVMTF IFCMIAVSDV GFPYRAKTNV MRANCLHTRR 660
  661 IFYEHDGSVS RSDSGYYFNY QDRRAFAPLE DSALDLTGLE PVANRCDDYV MCGIPCFYYS 720
  721 WCKWRQWDGW LPRESEVILP GELTLDFLGY TVLESGTVAR YEFELAGPPH MNLFIQPVGS 780
  781 AKVDDWSFVR KMLDEPEEFQ PPYQIFHSYG TDNTSLKFFI DMEKPDGIFD TPTLELAAVG 840
  841 HWVSFEYERD AEAKDFVAAF PDFVHVMEWP SIFKRYIF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle