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Protein Overview: FBpp0308554

General Information:
Name(s) found: FBpp0308554 [FlyBase]
Description(s) found:
Found 26 descriptions.
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  • type=protein; loc=2R:join(6767754..6767774,6767833..6768345,6768409..6769164,6769217..6770620); ID=FBpp0308554; name=Pex6-PC; parent=FBgn0033564,FBtr0339471; dbxref=FlyBase:FBpp0308554,FlyBase_Annotation_IDs:CG11919-PC; MD5=bb16f12948ea3288e4cf485de1a0b9d7; length=897; release=r5.56; species=Dmel; [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 897 amino acids

    Gene Ontology:
    Cellular Component: peroxisome [ISS]
    Biological Process: peroxisome organization [ISS]
    Molecular Function: ATP binding [IEA]
    nucleoside-triphosphatase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNENDDAKKV VGKRNSVSFD QQDPGQPRFS FSGRVQELVE GYNSAIQLLA PKWPWFLYPG  60
   61 YLTYAVYWRY AKYYKGKFLL TPIPNRLYDL LIKNEQIKSE HLVFASQEVY ENYAESPDVN 120
  121 FVNLVIRGRR VRIGKPLASD EGNMTQTVIK QMLQEAPHTI VAQILPAAQC QPNCLYVQEN 180
  181 FYGNILDRFQ IRSNCWVQVE HFADEQTIPG IATKAHVYLV ADPHELPAEL TEVILSNYFN 240
  241 TPRLMHRGHT YRIEVNAELV GTATYAHYYL IFAHLRHVHL KCIHLETKGS EFELQAIVAK 300
  301 NFSNLVQVPA SHSFLPRQVL DSMAIVENYP SGLRKPYKLL RSSVDAFLPK KSACLSSKHI 360
  361 FPVFLLQGER GSGKSKLVSA VAQELGMHIY GADCAEIVSQ VPSHTEMKLK AVFAKSQVCE 420
  421 PLMICFHNFE IFGIDNEGNE DLRLLSAFHV QVQELFNRDR KHPIVVVALT SDRHLKPMIQ 480
  481 GLFLEIINID MPSKEERFEI LRWMHVRETF NDIIYNQKAI EQLPLFSREN QSQFMPRISP 540
  541 SWRETLNVLQ DVAAKSQGFL LGDLQLLYDN AVRMKIRNRL GRTTLDMSHF AKNLTDMQSS 600
  601 FADSLGAPKV PKVYWSDIGG LAKLKDEIQS SIGLPLKHVH LMGKNLRRSG ILLYGPPGTG 660
  661 KTLVAKAVAT ECNLSFLSVQ GPELLNMYVG QSEQNVREVF SRARSAAPCV LFLDELDSLA 720
  721 PNRGVAGDSG GVMDRVVSQL LAEMDGMSDG DTSKPIFILA ATNRPDLIDP ALLRPGRFDK 780
  781 LFYVGPCSTA EDKAAVLRAQ TQRFALDAGV DMEQIAERLK SEMSGADLYS ICSNAWLSAV 840
  841 RRTIDGHLSG TISEKELVPE NVIVQEEDFT KSFNKFVPSI SAKDLEYFNN LKASYSV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..113] PSI-BLAST 5.154902 Crystal structure of N-terminal domain of E.Coli Lon Protease
    2 View Details [114..897] PSI-BLAST 156.0 VCP/p97

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.32705610464746 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.30342829757486 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.1900113436219 bayes_pls_golite062009
  • DNA binding
    		•  1.01872832572844 bayes_pls_golite062009
  • transcription factor activity
    		•  0.441125649252949 bayes_pls_golite062009
  • protein binding
    		•  0.37678401200507 bayes_pls_golite062009
  • catalytic activity
    		•  0.147263815852997 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle