| Protein: | FBpp0308554 |
| Organism: | Drosophila melanogaster |
| Length: | 897 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0308554.
| Description | E-value | Query Range |
Subject Range |
|
|
560.0 | [0..82] | [895..33] |
|
Region A: Residues: [1-113] |
1 11 21 31 41 51
| | | | | |
1 MNENDDAKKV VGKRNSVSFD QQDPGQPRFS FSGRVQELVE GYNSAIQLLA PKWPWFLYPG 60
61 YLTYAVYWRY AKYYKGKFLL TPIPNRLYDL LIKNEQIKSE HLVFASQEVY ENY
|
| Detection Method: |  |
| Confidence: | 5.154902 |
| Match: | 2aneA |
| Description: | Crystal structure of N-terminal domain of E.Coli Lon Protease |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.32705610464746 | bayes_pls_golite062009 |
| transcription regulator activity | 1.30342829757486 | bayes_pls_golite062009 |
| nucleic acid binding | 1.1900113436219 | bayes_pls_golite062009 |
| DNA binding | 1.01872832572844 | bayes_pls_golite062009 |
| transcription factor activity | 0.441125649252949 | bayes_pls_golite062009 |
| protein binding | 0.37678401200507 | bayes_pls_golite062009 |
| catalytic activity | 0.147263815852997 | bayes_pls_golite062009 |
|
Region A: Residues: [114-897] |
1 11 21 31 41 51
| | | | | |
1 AESPDVNFVN LVIRGRRVRI GKPLASDEGN MTQTVIKQML QEAPHTIVAQ ILPAAQCQPN 60
61 CLYVQENFYG NILDRFQIRS NCWVQVEHFA DEQTIPGIAT KAHVYLVADP HELPAELTEV 120
121 ILSNYFNTPR LMHRGHTYRI EVNAELVGTA TYAHYYLIFA HLRHVHLKCI HLETKGSEFE 180
181 LQAIVAKNFS NLVQVPASHS FLPRQVLDSM AIVENYPSGL RKPYKLLRSS VDAFLPKKSA 240
241 CLSSKHIFPV FLLQGERGSG KSKLVSAVAQ ELGMHIYGAD CAEIVSQVPS HTEMKLKAVF 300
301 AKSQVCEPLM ICFHNFEIFG IDNEGNEDLR LLSAFHVQVQ ELFNRDRKHP IVVVALTSDR 360
361 HLKPMIQGLF LEIINIDMPS KEERFEILRW MHVRETFNDI IYNQKAIEQL PLFSRENQSQ 420
421 FMPRISPSWR ETLNVLQDVA AKSQGFLLGD LQLLYDNAVR MKIRNRLGRT TLDMSHFAKN 480
481 LTDMQSSFAD SLGAPKVPKV YWSDIGGLAK LKDEIQSSIG LPLKHVHLMG KNLRRSGILL 540
541 YGPPGTGKTL VAKAVATECN LSFLSVQGPE LLNMYVGQSE QNVREVFSRA RSAAPCVLFL 600
601 DELDSLAPNR GVAGDSGGVM DRVVSQLLAE MDGMSDGDTS KPIFILAATN RPDLIDPALL 660
661 RPGRFDKLFY VGPCSTAEDK AAVLRAQTQR FALDAGVDME QIAERLKSEM SGADLYSICS 720
721 NAWLSAVRRT IDGHLSGTIS EKELVPENVI VQEEDFTKSF NKFVPSISAK DLEYFNNLKA 780
781 SYSV
|
| Detection Method: | |
| Confidence: | 156.0 |
| Match: | 1oz4A |
| Description: | VCP/p97 |
Matching Structure (courtesy of the PDB): |
|
