YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: U2A-PA

General Information:
Name(s) found: U2A-PA / FBpp0088015 [FlyBase]
Description(s) found:
Found 24 descriptions.
SHOW ALL
  • The gene U2A is referred to in FlyBase by the symbol Dmel\U2A (CG1406, FBgn0033210). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:3562867..3563857. It has the cytological map location 43E9. Based on sequence similarity, it is predicted to have molecular function</span>: mRNA binding. There is experimental evidence that it is involved in the biological process</span>: mitotic spindle organization. 4 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 265 amino acids

    Gene Ontology:
    Cellular Component: catalytic step 2 spliceosome [IDA]
    precatalytic spliceosome [IDA]
    U2 snRNP [ISS]
    small nuclear ribonucleoprotein complex [ISS]
    Biological Process: mitotic spindle organization [IMP]
    nuclear mRNA splicing, via spliceosome [IC][ISS]
    Molecular Function: mRNA binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKLTPELIN QSMQYINPCR ERELDLRGYK IPQIENLGAT LDQFDTIDLS DNDLRKLDNL  60
   61 PHLPRLKCLL LNNNRILRIS EGLEEAVPNL GSIILTGNNL QELSDLEPLV GFTKLETICL 120
  121 LINPVSTKPN YREYMAYKFP QLRLLDFRKI KQKDRQAAQE FFRTKQGKDV LKEISRKSKM 180
  181 SAAAAIAAEA GNGKGRGSEG GRLANPQDMQ RIREAIKRAS SLAEVERLSQ ILQSGQLPDK 240
  241 FQHEMEAVAQ NGAGHNGSGA VAMEY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..59] PSI-BLAST 16.69897 Splicesomal U2A' protein
    2 View Details [60..265] PSI-BLAST 4.69897 No description for 2p1mB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle