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Protein Overview: FBpp0310297, CG1...

General Information:
Name(s) found: FBpp0310297 [FlyBase]
FBpp0294014 [FlyBase]
CG10839-PA / FBpp0080358 [FlyBase]
Description(s) found:
Found 33 descriptions.
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  • type=protein; loc=2L:15979572..15980120; ID=FBpp0310297; name=CG10839-PC; parent=FBgn0028858,FBtr0343725; dbxref=FlyBase:FBpp0310297,FlyBase_Annotation_IDs:CG10839-PC; MD5=0d3d2a52067b6e169ed16c7ab57d40fe; length=182; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=2L:15979572..15980120; ID=FBpp0294014; name=CG10839-PB; parent=FBgn0028858,FBtr0305563; dbxref=REFSEQ:NP_001246039,GB_protein:AFH03713,FlyBase:FBpp0294014,FlyBase_Annotation_IDs:CG10839-PB; MD5=0d3d2a52067b6e169ed16c7ab57d40fe; length=182; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG10839 (CG10839, FBgn0028858). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:15979535..15980190. It has the cytological map location 35E1. Based on sequence similarity, it is predicted to have molecular function</span>: ATPase activity, coupled. Based on sequence similarity, it is predicted to be involved in the biological process</span>: microtubule-based movement. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 182 amino acids

    Gene Ontology:
    Cellular Component: dynein complex [ISS]
    microtubule associated complex [ISS]
    Biological Process: microtubule-based movement [ISS]
    Molecular Function: protein binding [IEA]
    ATPase activity, coupled [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKPTTLKDA LAKWEDRNKQ PAATATEIGL QFQYPPIEKM DPILNSLTEC QKLSLSSNMI  60
   61 EKITGISGMK NLKVLSLARN NLKTLNGIEP LADTLEELWV SYNNIEKTKP LESMKALRVF 120
  121 YISFNMIKDW TEFMRMGVPP NLSEITFVGN PLNENMDQSA FTAEAVRRLP NMKKLDGEPV 180
  181 IR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..182] PSI-BLAST 19.0 Outer arm dynein light chain 1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity
    		•  0.855005887426675 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  0.385952210584 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  0.3320262623287 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  0.317770809462228 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  0.316320686860908 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle