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Protein Overview: zuc-PA

General Information:
Name(s) found: zuc-PA / FBpp0079900 [FlyBase]
Description(s) found:
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  • gi|7297893|gb|AAF53139.1| CG12314 [Drosophila melanogaster] [NCBI NR]
  • gi|223967403|emb|CAR93432.1| CG12314-PA [Drosophila melanogaster] [NCBI NR]
  • gi|21428404|gb|AAM49862.1| LD05365p [Drosophila melanogaster] [NCBI NR]
  • gi|20129461|ref|NP_609530.1| CG12314 [Drosophila melanogaster] [NCBI NR]
  • Mitochondrial cardiolipin hydrolase OS=Drosophila melanogaster GN=zuc PE=1 SV=1 [Swiss-Prot]
  • The gene zucchini is referred to in FlyBase by the symbol Dmel\zuc (CG12314, FBgn0261266). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:11988735..11989861. It has the cytological map location 33B5-33F2. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: gene silencing by RNA; oogenesis; dorsal appendage formation; karyosome formation. 9 alleles are reported. The phenotypes of these alleles are annotated with: egg; oocyte; karyosome; egg chamber; dorsal appendage. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG12314-PA translation from_gene[CG12314 CG12314 FBgn0032389] seq_release:3 mol_weight=28520 cds_boundaries:(2L:11,977,937..11,978,695[-]) aa_length:253 transcript_info:[CG12314-RA seq_release:3] gene_info:[gene symbol:CG12314 FBgn0032389 gene_boundar [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VKD7) CG12314 protein (LD05365p) [DrosMelano7227.FASTAC.txt]
  • (AE003634) CG12314 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG12314-PA [Drosophila melanogaster]gi|21428404|gb|AAM49862.1| LD05365p [Drosophila melanogaster]gi|20129461|ref|NP_609530.1| CG12314-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2L:complement(11989063..11989824); ID=FBpp0079900; name=CG12314-PA; parent=FBgn0032389,FBtr0080316; dbxref=FlyBase:FBpp0079900,FlyBase_Annotation_IDs:CG12314-PA,GB_protein:AAF53139.1,REFSEQ:NP_609530,GB_protein:AAF53139; MD5=44c39047cc46 [fly-100309-contam.fasta]
  • CG12314-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • LD05365p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2L:complement(11989063..11989824); ID=FBpp0079900; name=CG12314-PA; parent=FBgn0032389,FBtr0080316; dbxref=FlyBase:FBpp0079900,FlyBase_Annotation_IDs:CG12314-PA,GB_protein:AAF53139.1,REFSEQ:NP_609530,GB_protein:AAF53139; MD5=44c39047cc46844257a896ab01384a5d; length=253; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2L:complement(11989063..11989824); ID=FBpp0079900; name=zuc-PA; parent=FBgn0261266,FBtr0080316; dbxref=FlyBase:FBpp0079900,FlyBase_Annotation_IDs:CG12314-PA,GB_protein:AAF53139.1,REFSEQ:NP_609530,GB_protein:AAF53139; MD5=44c39047cc46844257a896ab01384a5d; length=253; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • type=protein; loc=2L:complement(11989063..11989824); ID=FBpp0079900; name=zuc-PA; parent=FBgn0261266,FBtr0080316; dbxref=FlyBase:FBpp0079900,FlyBase_Annotation_IDs:CG12314-PA,GB_protein:AAF53139.1,REFSEQ:NP_609530,GB_protein:AAF53139,FlyMine:FBpp0079900,modMine:FBpp0079900; MD5=44c39047cc46844257a896ab01384a5d; length=253; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2L:complement(11989063..11989824); ID=FBpp0079900; name=zuc-PA; parent=FBgn0261266,FBtr0080316; dbxref=FlyBase:FBpp0079900,FlyBase_Annotation_IDs:CG12314-PA,GB_protein:AAF53139.1,REFSEQ:NP_609530,GB_protein:AAF53139,FlyMine:FBpp0079900,modMine:FBpp0079900; MD5=44c39047cc46844257a896ab01384a5d; length=253; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2L:complement(11989063..11989824); ID=FBpp0079900; name=zuc-PA; parent=FBgn0261266,FBtr0080316; dbxref=FlyBase:FBpp0079900,FlyBase_Annotation_IDs:CG12314-PA,GB_protein:AAF53139.1,REFSEQ:NP_609530,GB_protein:AAF53139,FlyMine:FBpp0079900,modMine:FBpp0079900; MD5=44c39047cc46844257a896ab01384a5d; length=253; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0079900 type=protein; loc=2L:complement(11989063..11989824); ID=FBpp0079900; name=zuc-PA; parent=FBgn0261266,FBtr0080316; dbxref=FlyBase:FBpp0079900,FlyBase_Annotation_IDs:CG12314-PA,GB_protein:AAF53139.1,REFSEQ:NP_609530,GB_protein:AAF53139,FlyMine:FBpp0079900,modMine:FBpp0079900; MD5=44c39047cc46844257a896ab01384a5d; length=253; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2L:complement(11989063..11989824); ID=FBpp0079900; name=zuc-PA; parent=FBgn0261266,FBtr0080316; dbxref=FlyBase:FBpp0079900,FlyBase_Annotation_IDs:CG12314-PA,GB_protein:AAF53139.1,REFSEQ:NP_609530,GB_protein:AAF53139,UniProt/Swiss-Prot:Q9VKD7,FlyMine:FBpp0079900,modMine:FBpp0079900; MD5=44c39047cc46844257a896ab01384a5d; length=253; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 253 amino acids

    Gene Ontology:
    Cellular Component: P granule [IDA]
    Biological Process: oogenesis [IMP][TAS]
    karyosome formation [IMP]
    dorsal appendage formation [IMP]
    gene silencing by RNA [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLITQIIMKQ IRDYPIVSTI SIAVSTVLAS EVIWKLVQCS RSKREKASRV HEVIIFNELG  60
   61 EICAAVHMRN SSMGSQKPQV SPCCNTHCSL RNVAKIVEQI DRAVYSIDLA IYTFTSLFLA 120
  121 DSIKRALQRG VIIRIISDGE MVYSKGSQIS MLAQLGVPVR VPITTNLMHN KFCIIDGFER 180
  181 VEEIRLLRKL KFMRPCYSIV ISGSVNWTAL GLGGNWENCI ITADDKLTAT FQAEFQRMWR 240
  241 AFAKTEGSQI QLK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..253] PSI-BLAST 25.69897 Nuclease Nuc

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.762303478549781 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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