YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	zuc-PA
Protein type:	Transmembrane
Type Confidence:	0.69
Topology Confidence:	0.43
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLITQIIMKQ IRDYPIVSTI SIAVSTVLAS EVIWKLVQCS RSKREKASRV HEVIIFNELG  60
   61 EICAAVHMRN SSMGSQKPQV SPCCNTHCSL RNVAKIVEQI DRAVYSIDLA IYTFTSLFLA 120
  121 DSIKRALQRG VIIRIISDGE MVYSKGSQIS MLAQLGVPVR VPITTNLMHN KFCIIDGFER 180
  181 VEEIRLLRKL KFMRPCYSIV ISGSVNWTAL GLGGNWENCI ITADDKLTAT FQAEFQRMWR 240
  241 AFAKTEGSQI QLK

Type	Start	End	Confidence
Cytoplasmic	1	13	0.43
Transmembrane Helix	14	34	0.58
Non-Cytoplasmic	35	253	0.74