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Protein Overview: FBpp0297906, FBp...

General Information:
Name(s) found: FBpp0304065 [FlyBase]
FBpp0297906 [FlyBase]
FBpp0297903 [FlyBase]
Oscillin-PB / FBpp0078735 [FlyBase]
Oscillin-PA / FBpp0078734 [FlyBase]
Description(s) found:
Found 55 descriptions.
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  • type=protein; loc=2L:join(5547815..5547912,5547973..5548100,5548168..5548709,5549017..5549070); ID=FBpp0304065; name=Oscillin-PH; parent=FBgn0031717,FBtr0331675; dbxref=FlyBase:FBpp0304065,FlyBase_Annotation_IDs:CG6957-PH,REFSEQ:NP_001260101,GB_protein:AGB92637; MD5=f2477a4b6319925d04a967c69d90e16e; length=273; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=2L:join(5547815..5547912,5547973..5548100,5548168..5548709,5549017..5549070); ID=FBpp0297906; name=Oscillin-PF; parent=FBgn0031717,FBtr0307063; dbxref=REFSEQ:NP_001245897,GB_protein:AFH03571,FlyBase:FBpp0297906,FlyBase_Annotation_IDs:CG6957-PF; MD5=f2477a4b6319925d04a967c69d90e16e; length=273; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=2L:join(5547815..5547912,5547973..5548100,5548168..5548709,5549017..5549070); ID=FBpp0297903; name=Oscillin-PC; parent=FBgn0031717,FBtr0307060; dbxref=REFSEQ:NP_001245894,GB_protein:AFH03568,FlyBase:FBpp0297903,FlyBase_Annotation_IDs:CG6957-PC; MD5=f2477a4b6319925d04a967c69d90e16e; length=273; release=r5.56; species=Dmel; [FlyBase]
  • The gene Oscillin is referred to in FlyBase by the symbol Dmel\Oscillin (CG6957, FBgn0031717). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:5547203..5549614. It has the cytological map location 25E6. Based on sequence similarity, it is predicted to have molecular function</span>: glucosamine-6-phosphate deaminase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: N-acetylglucosamine metabolic process. 5 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • The gene Oscillin is referred to in FlyBase by the symbol Dmel\Oscillin (CG6957, FBgn0031717). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:5547203..5549614. It has the cytological map location 25E6. Based on sequence similarity, it is predicted to have molecular function</span>: glucosamine-6-phosphate deaminase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: N-acetylglucosamine metabolic process. 5 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 273 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: N-acetylglucosamine metabolic process [IEA]
    Molecular Function: glucosamine-6-phosphate deaminase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLVILETSD SVGKWAAKYV MKRINDFQPS ADRYFVLGLP TGSTPLGMYK ELIEFHKQGK  60
   61 VSFQYVKTFN MDEYVGLARD HHESYHYFMW NNFFKHIDIE PKNVHILDGN AADLVAECNK 120
  121 FEDQIREAGG VELFIGGIGP DGHIAFNEPG SSLVSRTRVK TLAQDTLEAN ARFFDNDMSK 180
  181 VPKQALTVGV GTVMDSKEVM ILITGAHKAF ALYKAIEEGV NHMWTVSAFQ QHANTLMICD 240
  241 EDATLELRVK TVKYFKGILR DLDEGSPLEG YKN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..273] PSI-BLAST 98.221849 HUMAN GLUCOSAMINE-6-PHOSPHATE DEAMINASE ISOMERASE AT 1.75 A RESOLUTION COMPLEXED WITH N-ACETYL-GLUCOSAMINE-6-PHOSPHATE AND 2-DEOXY-2-AMINO-GLUCITOL-6-PHOSPHATE

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • glucosamine-6-phosphate deaminase activity
    		•  4.20201419087614 bayes_pls_golite062009
  • intramolecular oxidoreductase activity
    		•  2.15381323621148 bayes_pls_golite062009
  • intramolecular oxidoreductase activity, interconverting aldoses and ketoses
    		•  1.65800801564277 bayes_pls_golite062009
  • catalytic activity
    		•  1.31732715713197 bayes_pls_golite062009
  • ribose-5-phosphate isomerase activity
    		•  1.21538742769205 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.15193795385115 bayes_pls_golite062009
  • binding
    		•  0.790197816513984 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.527142798518238 bayes_pls_golite062009
  • 6-phosphogluconolactonase activity
    		•  0.480819049634739 bayes_pls_golite062009
  • DNA binding
    		•  0.465566131334457 bayes_pls_golite062009
  • isomerase activity
    		•  0.102415560220489 bayes_pls_golite062009
  • protein binding
    		•  0.0458232930850621 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle