YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|30060322

General Information:
Name(s) found: gi|30060322 [NCBI NR]
Description(s) found:
Found 6 descriptions.
SHOW ALL
  • gi|30060322|gb|AAO89091.1| ARNT exon 5 deletion variant; aryl hydrocarbon receptor nuclear translocator splice variant; bHLH/PAS protein [Rattus norvegicus] [NCBI NR]
    • Organism: Rattus norvegicus
    Length: 785 amino acids

    Gene Ontology:
    Cellular Component: nucleus [UNKNOWN][IDA]
    transcription factor complex [UNKNOWN]
    cytoplasm [UNKNOWN][IEA]
    Biological Process: regulation of transcription from RNA polymerase II promoter in response to oxidative stress [UNKNOWN][IEA]
    signal transduction [IEA]
    positive regulation of hormone biosynthetic process [UNKNOWN][IEA]
    regulation of transcription, DNA-dependent [IEA]
    positive regulation of transcription [UNKNOWN][IEA]
    positive regulation of transcription from RNA polymerase II promoter [UNKNOWN][IEA]
    response to toxin [NAS]
    embryonic placenta development [UNKNOWN][IEA]
    response to hypoxia [UNKNOWN][IEP]
    positive regulation of gene-specific transcription [UNKNOWN][IEA]
    cell differentiation [UNKNOWN][IEA]
    positive regulation of protein sumoylation [IEA]
    positive regulation vascular endothelial growth factor production [UNKNOWN][IEA]
    Molecular Function: DNA binding [UNKNOWN]
    protein binding [UNKNOWN][IPI]
    transcription coactivator activity [UNKNOWN][IEA]
    aryl hydrocarbon receptor binding [UNKNOWN][IEA]
    protein heterodimerization activity [UNKNOWN][IDA]
    RNA polymerase II transcription factor activity, enhancer binding [UNKNOWN][IEA]
    sequence-specific DNA binding [UNKNOWN][IDA]
    transcription factor binding [UNKNOWN]
    signal transducer activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATTANPEM TSDVPSLGPT IASGNPGPGI QGGGAVVQRA IKRRSGLDFD DEGEVNSKFL  60
   61 RCDDEQMCND KERFARENHS EIERRRRNKM TAYITELSDM VPTCSALARK PDKLTILRMA 120
  121 VSHMKSLRGT GNTSTDGSYK PSFLTDQELK HLILEAADGF LFIVSCETGR VVYVSDSVTP 180
  181 VLNQPQSEWF GSTLYDQVHP DDVDKLREQL STSENALTGR ILDLKTGTVK KEGQQSSMRM 240
  241 CMGSRRSFIC RMRCGTSSVD PVSMNRLSFL RNRCRNGLGS VKEGEPHFVV VHCTGYIKAW 300
  301 PPAGVSLPDD DPEAGQGSKF CLVAIGRLQV TSSPNCTDMS NICQPTEFIS RHNIEGIFTF 360
  361 VDHRCVATVG YQPQELLGKN IVEFCHPEDQ QLLRDSFQQV VKLKGQVLSV MFRFRAKNRE 420
  421 WLWMRTSSFT FQNPYSDEMS IFICTNTNVK NSSQEPRPTL SNTIQRSQLG PTTNLSLEMG 480
  481 TGQLASRQQQ QQQQQQQQQQ QQQTELDMVP GRDGLASYSH SQVSVQPVAT AGSEHSKPLE 540
  541 KSEGLFVQDR DPRFSEIYPN ISADQSKGLS SSTVPATQQL FSQGSSFPPN PRPAENFRNS 600
  601 GLTPPVTIVQ PSSSAGQILA QISRHSNLTQ GSAPTWTSST RPGFSAQLPT QATAKTRSSQ 660
  661 FGVNNFQTSS SFSAMSLPGA PTASPSTAAY PTLPNRGSNF PPETGQTTGQ FQTRTAEGVG 720
  721 VWPQWQGQQP HHRSSSNEQH VQPTSAQPSS QPEVFQEMLS MLGDQSNTYN NEEFPDLTMF 780
  781 PPFSE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle