YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|30060324

General Information:
Name(s) found: gi|30060324 [NCBI NR]
Description(s) found:
Found 7 descriptions.
SHOW ALL
  • gi|30060324|gb|AAO89092.1| ARNT exon 6 deletion variant; aryl hydrocarbon receptor nuclear translocator splice variant; bHLH/PAS protein [Rattus norvegicus] [NCBI NR]
    • Organism: Rattus norvegicus
    Length: 753 amino acids

    Gene Ontology:
    Cellular Component: nucleus [UNKNOWN][IDA]
    transcription factor complex [UNKNOWN]
    cytoplasm [UNKNOWN][IEA]
    Biological Process: regulation of transcription from RNA polymerase II promoter in response to oxidative stress [UNKNOWN][IEA]
    signal transduction [IEA]
    positive regulation of hormone biosynthetic process [UNKNOWN][IEA]
    regulation of transcription, DNA-dependent [IEA]
    positive regulation of transcription [UNKNOWN][IEA]
    positive regulation of transcription from RNA polymerase II promoter [UNKNOWN][IEA]
    response to toxin [NAS]
    embryonic placenta development [UNKNOWN][IEA]
    response to hypoxia [UNKNOWN][IEP]
    positive regulation of gene-specific transcription [UNKNOWN][IEA]
    cell differentiation [UNKNOWN][IEA]
    positive regulation of protein sumoylation [IEA]
    positive regulation vascular endothelial growth factor production [UNKNOWN][IEA]
    Molecular Function: DNA binding [UNKNOWN]
    protein binding [UNKNOWN][IPI]
    transcription coactivator activity [UNKNOWN][IEA]
    aryl hydrocarbon receptor binding [UNKNOWN][IEA]
    protein heterodimerization activity [UNKNOWN][IDA]
    RNA polymerase II transcription factor activity, enhancer binding [UNKNOWN][IEA]
    sequence-specific DNA binding [UNKNOWN][IDA]
    transcription factor binding [UNKNOWN]
    signal transducer activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATTANPEM TSDVPSLGPT IASGNPGPGI QGGGAVVQRA IKRRSGLDFD DEGEVNSKFL  60
   61 RCDDEQMCND KERFARSDDE QSSADKERLA RENHSEIERR RRNKMTAYIT ELSDMELKHL 120
  121 ILEAADGFLF IVSCETGRVV YVSDSVTPVL NQPQSEWFGS TLYDQVHPDD VDKLREQLST 180
  181 SENALTGRIL DLKTGTVKKE GQQSSMRMCM GSRRSFICRM RCGTSSVDPV SMNRLSFLRN 240
  241 RCRNGLGSVK EGEPHFVVVH CTGYIKAWPP AGVSLPDDDP EAGQGSKFCL VAIGRLQVTS 300
  301 SPNCTDMSNI CQPTEFISRH NIEGIFTFVD HRCVATVGYQ PQELLGKNIV EFCHPEDQQL 360
  361 LRDSFQQVVK LKGQVLSVMF RFRAKNREWL WMRTSSFTFQ NPYSDEMSIF ICTNTNVKNS 420
  421 SQEPRPTLSN TIQRSQLGPT TNLSLEMGTG QLASRQQQQQ QQQQQQQQQQ QTELDMVPGR 480
  481 DGLASYSHSQ VSVQPVATAG SEHSKPLEKS EGLFVQDRDP RFSEIYPNIS ADQSKGLSSS 540
  541 TVPATQQLFS QGSSFPPNPR PAENFRNSGL TPPVTIVQPS SSAGQILAQI SRHSNLTQGS 600
  601 APTWTSSTRP GFSAQLPTQA TAKTRSSQFG VNNFQTSSSF SAMSLPGAPT ASPSTAAYPT 660
  661 LPNRGSNFPP ETGQTTGQFQ TRTAEGVGVW PQWQGQQPHH RSSSNEQHVQ PTSAQPSSQP 720
  721 EVFQEMLSML GDQSNTYNNE EFPDLTMFPP FSE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle