Protein Overview: SMN_RAT

General Information:
Name(s) found:	SMN_RAT [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|3024613\|sp\|O35876.1\|SMN_RAT RecName: Full=Survival motor neuron protein [NCBI NR] gi\|2393771\|gb\|AAB96377.1\| survival of motor neuron [Rattus norvegicus] [NCBI NR] gi\|11968084\|ref\|NP_071954.1\| survival motor neuron 1 [Rattus norvegicus] [NCBI NR] Survival motor neuron protein OS=Rattus norvegicus GN=Smn1 PE=1 SV=1 [Swiss-Prot] Ensembl_locations(Chr-bp):2-28384347 Survival motor neuron protein [hmr_yeast5_DM3-1_pombe.fasta] survival motor neuron [HMR_022704-rand.fasta] survival of motor neuron 1, telomeric [Rattus norvegicus]gi\|3024613\|sp\|O35876\|SMN_RAT Survival motor neuron proteingi\|2393771\|gb\|AAB96377.1\| survival of motor neuron [Rattus norvegicus] [nrdb_11152004_Chlamydomonas] Tax_Id=10116 Survival motor neuron protein [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta] (NM_022509) survival motor neuron [Rattus norvegicus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta] Survival motor neuron protein [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] survival motor neuron 1 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] survival of motor neuron [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Tax_Id=10116 SURVIVAL MOTOR NEURON PROTEIN [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta] survival of motor neuron 1, telomeric [Rattus norvegicus] [nr-271106-contam.fasta] Tax_Id=10116 Gene_Symbol=Smn1 Survival motor neuron protein [rat-ipi-250309-contam.fasta] Survival motor neuron protein OS=Rattus norvegicus GN=Smn1 [011711_HMR.fasta] Survival motor neuron protein OS=Rattus norvegicus GN=Smn1 PE=2 SV=1 [UNIPROT_RAT_07-21-2011_reversed.fasta]
Organism:	Rattus norvegicus
Length:	289 amino acids
Gene Ontology:
Cellular Component:	nucleus [UNKNOWN][IEA] cytoplasm [UNKNOWN][IEA] Cajal body [IDA] spliceosomal complex [IEA] cytosol [UNKNOWN] nucleoplasm [UNKNOWN]
Biological Process:	RNA splicing [IEA] synaptic transmission [IEP] mRNA processing [IEA] spliceosome assembly [TAS] spliceosomal snRNP assembly [UNKNOWN]
Molecular Function:	RNA binding [IEA] protein binding [UNKNOWN][IDA] fibroblast growth factor binding [IPI]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMGSGGGAG SEQEDTVLFR RGTGQSDDSD IWDDTALIKA YDKAVASFKH ALKNGDMCET  60
   61 SDKPKGTARR KPAKKNKNQK KNATAPLKQW KAGDKCSAVW SEDGCVYPAT ITSVDLKRET 120
  121 CVVVYTGYGN KEEQNLSDLL SPTCEVANNT EQNTQENESQ VSTDDSEHSS RSLRSKAHSK 180
  181 SKAAPWTSFL PPPPPVPGAG LGPGKPGLRF SGPPPPPPPP PPFLPCWMPP FPSGPPIIPP 240
  241 PPPISPDCLD DTDALGSMLI SWYMSGYHTG YYMGFRQNKK EGKKCSHTN

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.97

Protein Overview: SMN_RAT

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: