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Protein Overview: gi|186910257, gi...

General Information:
Name(s) found: gi|186910257 [NCBI NR]
gi|149064955 [NCBI NR]
gi|109473099 [NCBI NR]
gi|109471729 [NCBI NR]
Description(s) found:
Found 15 descriptions.
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  • gi|186910257|ref|NP_001119562.1| split hand/foot malformation (ectrodactyly) type 1 [Rattus norvegicus] [NCBI NR]
  • gi|149064955|gb|EDM15031.1| rCG28037 [Rattus norvegicus] [NCBI NR]
  • gi|109473099|ref|XP_001054221.1| PREDICTED: similar to 26 proteasome complex subunit DSS1 (Deleted in split hand/split foot protein 1) (Split hand/foot deleted protein 1 homolog) [Rattus norvegicus] [NCBI NR]
  • gi|109471729|ref|XP_001057613.1| PREDICTED: similar to 26 proteasome complex subunit DSS1 (Deleted in split hand/split foot protein 1) (Split hand/foot deleted protein 1 homolog) [Rattus norvegicus] [NCBI NR]
    • Organism: Rattus norvegicus
    Length: 70 amino acids

    Gene Ontology:
    Cellular Component: proteasome complex [UNKNOWN]
    integrator complex [UNKNOWN]
    Biological Process: proteolysis [UNKNOWN]
    double-strand break repair via homologous recombination [UNKNOWN]
    Molecular Function: protein binding [UNKNOWN]
    peptidase activity [UNKNOWN]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEKKQPVDL GLLEEDDEFE EFPAEDWAGL DEDEDAHVWE DNWDDDNVED DFSNQLRAEL  60
   61 EKHGYKMETS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..70] Pfam 34.309804 No description for PF05160.4 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle