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Protein Overview: gi|1293097

General Information:
Name(s) found: gi|1293097 [NCBI NR]
Description(s) found:
Found 3 descriptions.
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  • gi|1293097|gb|AAA98613.1| apolipoprotein B [NCBI NR]
    • Organism: Rattus norvegicus
    Length: 576 amino acids

    Gene Ontology:
    Cellular Component: very-low-density lipoprotein particle [UNKNOWN][IEA]
    chylomicron [UNKNOWN]
    intermediate-density lipoprotein particle [UNKNOWN][IEA]
    low-density lipoprotein particle [UNKNOWN][IEA]
    microsome [UNKNOWN][IDA]
    endoplasmic reticulum [UNKNOWN][IEA]
    extracellular region [UNKNOWN][IEA]
    plasma membrane [UNKNOWN]
    endoplasmic reticulum lumen [UNKNOWN]
    extracellular space [IDA]
    clathrin-coated endocytic vesicle membrane [UNKNOWN]
    vesicle membrane [IDA]
    endosome lumen [UNKNOWN]
    endosome membrane [UNKNOWN]
    vesicle lumen [IDA]
    mature chylomicron [UNKNOWN][IEA]
    Biological Process: low-density lipoprotein particle remodeling [UNKNOWN][IEA]
    post-embryonic development [UNKNOWN][IEA]
    nervous system development [UNKNOWN][IEA]
    cholesterol metabolic process [UNKNOWN][IEA]
    steroid metabolic process [IEA]
    lipoprotein metabolic process [UNKNOWN]
    response to virus [UNKNOWN][IEA]
    lipoprotein biosynthetic process [UNKNOWN][IEA]
    lipoprotein catabolic process [UNKNOWN][IEA]
    cholesterol homeostasis [UNKNOWN][IEA]
    triglyceride mobilization [UNKNOWN][IEA]
    lipoprotein transport [UNKNOWN][IEA]
    in utero embryonic development [UNKNOWN][IEA]
    cholesterol transport [UNKNOWN][IEA]
    low-density lipoprotein particle clearance [UNKNOWN][IEA]
    response to organic substance [IEP]
    spermatogenesis [UNKNOWN][IEA]
    response to carbohydrate stimulus [IDA]
    fertilization [UNKNOWN][IEA]
    artery morphogenesis [UNKNOWN][IEA]
    lipid transport [IEA]
    sperm motility [UNKNOWN][IEA]
    regulation of cholesterol biosynthetic process [UNKNOWN][IEA]
    lipid metabolic process [UNKNOWN][IDA]
    lipid catabolic process [UNKNOWN][IEA]
    positive regulation of cholesterol storage [UNKNOWN][IEA]
    response to selenium ion [IEP]
    positive regulation of macrophage derived foam cell differentiation [UNKNOWN][IEA]
    triglyceride catabolic process [UNKNOWN][IMP]
    positive regulation of lipid storage [UNKNOWN]
    Molecular Function: protein binding [IPI]
    low-density lipoprotein receptor binding [UNKNOWN][IEA]
    lipid transporter activity [IEA]
    protein heterodimerization activity [UNKNOWN][IEA]
    heparin binding [UNKNOWN][IEA]
    lipid binding [IMP]
    phospholipid binding [UNKNOWN][IEA]
    cholesterol transporter activity [UNKNOWN][IEA]
    enzyme binding [UNKNOWN][IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NLAKSIHNLY LFVENVDLNQ ISSSGASWIQ NVDTKYQIRI QIQEKLQHLR TQIHNIDIQQ  60
   61 LAAELKQQIE ALDVPMHLDQ LRTAILFQRI SVIIERVKYF VMNLIEDFKV TEKINTFRVI 120
  121 VRELIEKYEV DRQIQVLMDK SIELAHRYSL SEPLQKLSNV LQQIEIKDYY DKLVGFIDDT 180
  181 VEWIKAVSFK NIIEELNRLI DMSVKKLKAF DYHQFVDKTN SKIREMTQRI NAEIQALELP 240
  241 QKTEALKLWV EDFKTTVSNS LEKLKDTKVT VVVDWLQDGL AQIKAQFQDA LEDVRDRIYQ 300
  301 MDIQGELERC LSLVSQVYST VVTYISDWWT LTAKNITDFA EQYSTQKWAE SVKALVEQGF 360
  361 IVPEIQTFLG TMPAFEVSLH ALQEANFQTP DFIVPLTDLR IPSIWINFKM LKNVKIPLRF 420
  421 STPEFTLLNT FRVRSFTITL LEIKAKIIRT IDQMLSSELQ WPLPEVYLRA LEMVNISLAR 480
  481 LSLPDFHVPE ITIPEFTIPN VNLKDLQVPD LHIPEFQLPH LSCTTEIPAF GKLHSVLKIQ 540
  541 SPLFILDASA NIQNITTSEN KAEIVASVTA RGESKF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle