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Protein Overview: VAMP2_RAT

General Information:
Name(s) found: VAMP2_RAT [Swiss-Prot]
Description(s) found:
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  • gi|6981614|ref|NP_036795.1| vesicle-associated membrane protein 2 [Rattus norvegicus] [NCBI NR]
  • gi|51704188|sp|P63045.2|VAMP2_RAT RecName: Full=Vesicle-associated membrane protein 2; Short=VAMP-2; AltName: Full=Synaptobrevin-2 [NCBI NR]
  • gi|49258148|gb|AAH74003.1| Vesicle-associated membrane protein 2 [Rattus norvegicus] [NCBI NR]
  • gi|207627|gb|AAA42321.1| vesicle associated membrane protein VAMP-2 [NCBI NR]
  • gi|149053023|gb|EDM04840.1| vesicle-associated membrane protein 2, isoform CRA_a [Rattus norvegicus] [NCBI NR]
  • pir||B34288 synaptobrevin 2 - rat [NCBI NR]
  • Vesicle-associated membrane protein 2 OS=Rattus norvegicus GN=Vamp2 PE=1 SV=2 [Swiss-Prot]
  • Ensembl_locations(Chr-bp):10-53427040 vesicle-associated membrane protein 2 [hmr_yeast5_DM3-1_pombe.fasta]
  • vesicle-associated membrane protein 2; synaptobrevin 2; RATVAMPIR; VAMP-2; Synaptobrevin 2 (vesicle-associated membrane protein VAMP-2); Vesicle-associated membrane protein (synaptobrevin 2) [HMR_022704-rand.fasta]
  • vesicle-associated membrane protein 2; VAMP-2; synaptobrevin 2; RATVAMPIR; Synaptobrevin 2 (vesicle-associated membrane protein VAMP-2); Vesicle-associated membrane protein (synaptobrevin 2) [071204_hmrz_cont.fasta]
  • vesicle-associated membrane protein 2 [Rattus norvegicus]gi|6678551|ref|NP_033523.1| vesicle-associated membrane protein 2 [Mus musculus]gi|49258148|gb|AAH74003.1| Vesicle-associated membrane protein 2 [Rattus norvegicus]gi|32767121|gb|AAH55105.1| Vesi [nrdb_11152004_Chlamydomonas]
  • (NM_012663) synaptobrevin 2 (vesicle-associated membrane protein, VAMP-2); Vesicle-associated membrane protein (synaptobrevin 2) [Rattus norvegicus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • Vesicle-associated membrane protein 2 (VAMP-2) (Synaptobrevin-2) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • vesicle-associated membrane protein 2 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • vesicle-associated membrane protein 2, isoform CRA_a [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Vesicle-associated membrane protein 2 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • vesicle associated membrane protein VAMP-2 [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Vesicle-associated membrane protein 2 OS=Rattus norvegicus GN=Vamp2 [011711_HMR.fasta]
  • Isoform of P63045, Vesicle-associated membrane protein 2 OS=Rattus norvegicus GN=Vamp2 PE=1 SV=2 [RAT.fasta.20160308]
    • Organism: Rattus norvegicus
    Length: 116 amino acids

    Gene Ontology:
    Cellular Component: synaptosome [IDA]
    synaptic vesicle [UNKNOWN]
    secretory granule [UNKNOWN][IDA]
    microsome [IDA]
    synapse [UNKNOWN][IEA]
    clathrin sculpted glutamate transport vesicle membrane [UNKNOWN]
    plasma membrane [UNKNOWN][IDA]
    zymogen granule membrane [UNKNOWN]
    secretory granule membrane [UNKNOWN]
    synaptobrevin 2-SNAP-25-syntaxin-1a-complexin I complex [IDA]
    synaptobrevin 2-SNAP-25-syntaxin-1a complex [IDA]
    integral to membrane [IEA]
    cell junction [IEA]
    SNARE complex [IDA]
    cytoplasmic vesicle [UNKNOWN][IEA]
    synaptic vesicle membrane [UNKNOWN][IEA]
    Biological Process: response to glucose stimulus [IDA]
    cellular membrane fusion [UNKNOWN]
    vesicle-mediated transport [IMP]
    protein complex assembly [IDA]
    protein transport [IMP]
    cellular membrane organization [UNKNOWN]
    calcium ion-dependent exocytosis [UNKNOWN]
    post-Golgi vesicle-mediated transport [UNKNOWN]
    synaptic vesicle exocytosis [UNKNOWN]
    regulation of exocytosis [UNKNOWN][IMP][TAS]
    Molecular Function: calmodulin binding [UNKNOWN]
    protein binding [UNKNOWN][IPI]
    syntaxin binding [UNKNOWN]
    syntaxin-1 binding [IDA][IPI]
    myosin binding [IPI]
    SNARE binding [UNKNOWN][IDA]
    phospholipid binding [UNKNOWN]
    protein complex binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSATAATVPP AAPAGEGGPP APPPNLTSNR RLQQTQAQVD EVVDIMRVNV DKVLERDQKL  60
   61 SELDDRADAL QAGASQFETS AAKLKRKYWW KNLKMMIILG VICAIILIII IVYFST

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..116] PSI-BLAST 20.69897 Synaptobrevin


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle