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Protein Overview: gi|14587247

General Information:
Name(s) found: gi|14587247 [NCBI NR]
Description(s) found:
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  • gi|14587247|gb|AAK70506.1|AF390079_1 VSX2-like homeodomain protein [Rattus norvegicus] [NCBI NR]
  • Ensembl_locations(Chr-bp):6-104802767 VSX2-like homeodomain protein [hmr_yeast5_DM3-1_pombe.fasta]
  • VSX2-like homeodomain protein [Rattus norvegicus] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10116 VSX2-LIKE HOMEODOMAIN PROTEIN [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • VSX2-like homeodomain protein (Fragment) OS=Rattus norvegicus GN=Vsx2 [011711_HMR.fasta]
    • Organism: Rattus norvegicus
    Length: 38 amino acids

    Gene Ontology:
    Cellular Component: nucleus [UNKNOWN][IEA]
    cytoplasm [UNKNOWN][IEA]
    nucleolus [UNKNOWN][IEA]
    cellular_component [ND]
    intracellular [UNKNOWN][IEA]
    Biological Process: biological_process [ND]
    retinal bipolar neuron differentiation [UNKNOWN][IEA]
    negative regulation of cell proliferation [UNKNOWN][IEA]
    retina morphogenesis in camera-type eye [UNKNOWN]
    positive regulation of cell proliferation [UNKNOWN][IEA]
    camera-type eye development [UNKNOWN][IEA]
    cell fate commitment [UNKNOWN][IEA]
    regulation of transcription, DNA-dependent [IEA]
    positive regulation of transcription from RNA polymerase II promoter [UNKNOWN][IEA]
    Molecular Function: transcription factor activity [IEA]
    sequence-specific DNA binding [IEA]
    molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SYQLEELEKA FNEAHYPDVY AREMLAMKTE IPEDRIQV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle