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Protein Overview: STP1_RAT

General Information:
Name(s) found: STP1_RAT [Swiss-Prot]
Description(s) found:
Found 22 descriptions.
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  • Spermatid nuclear transition protein 1 OS=Rattus norvegicus GN=Tnp1 PE=1 SV=2 [Swiss-Prot]
    • Organism: Rattus norvegicus
    Length: 55 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    chromosome [IEA]
    nucleosome [UNKNOWN][ISS]
    male germ cell nucleus [IDA]
    Biological Process: single strand break repair [UNKNOWN][ISS]
    chromatin remodeling [UNKNOWN][ISS]
    spermatid nucleus elongation [UNKNOWN][ISS]
    sperm motility [UNKNOWN][ISS]
    negative regulation of transcription, DNA-dependent [UNKNOWN][ISS]
    multicellular organismal development [IEA]
    spermatid development [UNKNOWN][ISS]
    spermatogenesis [UNKNOWN][IEA]
    cell differentiation [IEA]
    chromatin silencing [UNKNOWN][ISS]
    sexual reproduction [UNKNOWN][ISS]
    nucleosome disassembly [UNKNOWN][ISS]
    Molecular Function: DNA binding [UNKNOWN][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTSRKLKTH GMRRGKNRAP HKGVKRGGSK RKYRKSSLKS RKRGDDASRN YRSHL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..55] Pfam 35.30103 No description for PF02079.7 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle