Protein Overview: ELOA1_RAT

General Information:
Name(s) found:	ELOA1_RAT [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|8394425\|ref\|NP_058799.1\| transcription elongation factor B (SIII), polypeptide 3 [Rattus norvegicus] [NCBI NR] gi\|32699412\|sp\|Q63187.1\|ELOA1_RAT RecName: Full=Transcription elongation factor B polypeptide 3; AltName: Full=RNA polymerase II transcription factor SIII subunit A; AltName: Full=SIII p110; AltName: Full=Elongin-A; Short=EloA; AltName: Full=Elongin 110 k [NCBI NR] gi\|1019649\|gb\|AAA82095.1\| elongin A [Rattus norvegicus] [NCBI NR] Transcription elongation factor B polypeptide 3 OS=Rattus norvegicus GN=Tceb3 PE=1 SV=1 [Swiss-Prot] (Q63187) Transcription elongation factor B polypeptide 3 (RNA polymerase II transcription factor SIII subunit A) (SIII p110) (Elongin A) (EloA) (Elongin 110 kDa subunit) [Swiss-Prot] Ensembl_locations(Chr-bp):5-175218595 Elongin A [hmr_yeast5_DM3-1_pombe.fasta] transcription elongation factor B (SIII), polypeptide 3; RNA polymerase II transcription factor elongin subunit A; transcription elongation factor B (SIII), polypeptide 3 (110kD); RNA polymerase II transcription factor elongin subunit A (110 kDa); transcr [HMR_022704-rand.fasta] transcription elongation factor B (SIII), polypeptide 3 [Rattus norvegicus]gi\|32699412\|sp\|Q63187\|ELA1_RAT Transcription elongation factor B polypeptide 3 (RNA polymerase II transcription factor SIII subunit A) (SIII p110) (Elongin A) (EloA) (Elongin 110 [nrdb_11152004_Chlamydomonas] Tax_Id=10116 Transcription elongation factor B polypeptide 3 [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta] (NM_017103) RNA polymerase II transcription factor elongin subunit A (110 kDa) [Rattus norvegicus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta] Transcription elongation factor B polypeptide 3 (RNA polymerase II transcription factor SIII subunit A) (SIII p110) (Elongin-A) (EloA) (Elongin 110 kDa subunit) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] elongin A [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Tax_Id=10116 TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 3 [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta] transcription elongation factor B (SIII), polypeptide 3 [Rattus norvegicus] [nr-271106-contam.fasta] Tax_Id=10116 Gene_Symbol=Tceb3 Transcription elongation factor B polypeptide 3 [rat-ipi-250309-contam.fasta] Transcription elongation factor B polypeptide 3 OS=Rattus norvegicus GN=Tceb3 [011711_HMR.fasta]
Organism:	Rattus norvegicus
Length:	773 amino acids
Gene Ontology:
Cellular Component:	nucleus [UNKNOWN][IEA][TAS] transcription elongation factor complex [IDA] cytoplasm [UNKNOWN][IEA] integral to membrane [IEA] nucleoplasm [UNKNOWN]
Biological Process:	regulation of transcription [IEA] regulation of transcription from RNA polymerase II promoter [IDA] RNA elongation from RNA polymerase II promoter [IDA]
Molecular Function:	DNA binding [IEA] RNA polymerase II transcription elongation factor activity [IDA] protein binding [IEA] transcription regulator activity [IEA] double-stranded DNA binding [TAS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAESALQVV EKLQARLAAN PDPKKLLKYL KKLSVLPITV DILVETGVGK TVNSFRKHEQ  60
   61 VGNFARDLVA QWKKLVPVER NNEAEDQDFE KSNSRKRPRD VPQQEEEAEG NYQESWQASG 120
  121 SQPYSPEHRQ KKHRKLPELE RPHKVAHGHE RRDERKRCHK VSPPYSSDPE SSDYGHVQSP 180
  181 PPSSPHQMYT DLSRSPEMDQ EPIVSHPKPG KVHSNTFQDR LGVSHLGEHQ GKGAVSQNKP 240
  241 HKSSHKEKRP VDARGDEKSS VMGREKSHKA SSKEESRRLL SEDSAKEKLP SSVVKKEKDR 300
  301 EGNSLKKKLS PALDVASDNH FKKPKHKDSE KIKSDKNKQS VDSVDSGRGT GDPLPRAKDK 360
  361 VPNNLKAQEG KVRTNSDRKS PGSLPKVEEM DMDDEFEQPT MSFESYLSYD QPRKKKKKVV 420
  421 KTSGTALGEK GLKKKDSKST SKNLNSAQKL PKANENKSDK LQPAGAEPTR PRKVPTDVLP 480
  481 ALPDIPLPAI QTNYRPLPSL ELISSFQPKR KAFSSPQEEE EAGFTGRRMN SKMQVYSGSK 540
  541 CAYLPKMMTL HQQCIRVLKN NIDSIFEVGG VPYSVLEPVL ERCTPDQLYR IEECNHVLIE 600
  601 ETDQLWKVHC HRDFKEERPE EYESWREMYL RLQDAREQRL RLLTNNIRSA HANKPKGRQA 660
  661 KMAFVNSVAK PPRDVRRRQE KFGTGGAAVP EKVRIKPAPY TTGSSHVPAS NSSSSFHSSP 720
  721 EELAYEGPST SSAHLAPVAS SSVSYDPRKP AVKKIAPMMA KTIKAFKNRF SRR

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Protein Overview: ELOA1_RAT

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: