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Protein Overview: gi|2119386, gi|6...

General Information:
Name(s) found: gi|623549 [NCBI NR]
gi|2119386 [NCBI NR]
Description(s) found:
Found 7 descriptions.
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  • gi|623549|gb|AAA74690.1| apolipoprotein B [NCBI NR]
  • pir||I56333 apolipoprotein B - rat (fragment) [NCBI NR]
    • Organism: Rattus norvegicus
    Length: 989 amino acids

    Gene Ontology:
    Cellular Component: very-low-density lipoprotein particle [UNKNOWN][IEA]
    chylomicron [UNKNOWN]
    intermediate-density lipoprotein particle [UNKNOWN][IEA]
    low-density lipoprotein particle [UNKNOWN][IEA]
    microsome [UNKNOWN][IDA]
    endoplasmic reticulum [UNKNOWN][IEA]
    extracellular region [UNKNOWN][IEA]
    plasma membrane [UNKNOWN]
    endoplasmic reticulum lumen [UNKNOWN]
    extracellular space [IDA]
    clathrin-coated endocytic vesicle membrane [UNKNOWN]
    vesicle membrane [IDA]
    endosome lumen [UNKNOWN]
    endosome membrane [UNKNOWN]
    vesicle lumen [IDA]
    mature chylomicron [UNKNOWN][IEA]
    Biological Process: low-density lipoprotein particle remodeling [UNKNOWN][IEA]
    post-embryonic development [UNKNOWN][IEA]
    nervous system development [UNKNOWN][IEA]
    cholesterol metabolic process [UNKNOWN][IEA]
    steroid metabolic process [IEA]
    lipoprotein metabolic process [UNKNOWN]
    response to virus [UNKNOWN][IEA]
    lipoprotein biosynthetic process [UNKNOWN][IEA]
    lipoprotein catabolic process [UNKNOWN][IEA]
    cholesterol homeostasis [UNKNOWN][IEA]
    triglyceride mobilization [UNKNOWN][IEA]
    lipoprotein transport [UNKNOWN][IEA]
    in utero embryonic development [UNKNOWN][IEA]
    cholesterol transport [UNKNOWN][IEA]
    low-density lipoprotein particle clearance [UNKNOWN][IEA]
    response to organic substance [IEP]
    spermatogenesis [UNKNOWN][IEA]
    response to carbohydrate stimulus [IDA]
    fertilization [UNKNOWN][IEA]
    artery morphogenesis [UNKNOWN][IEA]
    lipid transport [IEA]
    sperm motility [UNKNOWN][IEA]
    regulation of cholesterol biosynthetic process [UNKNOWN][IEA]
    lipid metabolic process [UNKNOWN][IDA]
    lipid catabolic process [UNKNOWN][IEA]
    positive regulation of cholesterol storage [UNKNOWN][IEA]
    response to selenium ion [IEP]
    positive regulation of macrophage derived foam cell differentiation [UNKNOWN][IEA]
    triglyceride catabolic process [UNKNOWN][IMP]
    positive regulation of lipid storage [UNKNOWN]
    Molecular Function: protein binding [IPI]
    low-density lipoprotein receptor binding [UNKNOWN][IEA]
    lipid transporter activity [IEA]
    protein heterodimerization activity [UNKNOWN][IEA]
    heparin binding [UNKNOWN][IEA]
    lipid binding [IMP]
    phospholipid binding [UNKNOWN][IEA]
    cholesterol transporter activity [UNKNOWN][IEA]
    enzyme binding [UNKNOWN][IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NSKGTRSSVR LQGASNFAGI WNFEVGENFA GEATLRRIYG TWEHNMINHL QVFSYFDTKG  60
   61 KQTCRATLEL SPWTMSTLLQ VHVSQPSPLF DLHHFDQEVI LKASTKNQKV SWKSEVQVES 120
  121 QVLQHNAHFS NDQEEVRLDI AGSLEGQLWD LENFFLPAFG KSLRELLQID GKRQYLQAST 180
  181 SLHYTKNPNG YLLSLPVQEL TDRFIIPGLK LNDFSGIKIY KKLSTSPFAL NLTMLPKVKF 240
  241 PGVDLLTQYS KPEGSSVPTF ETTIPEIQLT VSQFTLPKSF PVGNTVFDLN KLTNLIADVD 300
  301 LPSITLPEQT IEIPSLEFSV PAGIFIPFFG ELTAHVGMAS PLYNVTWSTG WKNKADHVET 360
  361 FLDSTCSSTL QFLEYALKVV GTHRIENDKF IYKIKGTLQH CDFNVKYNED GIFEGLWDLE 420
  421 GEAHLDITSP ALTDFHLHYK EDKTSVSASA ASPAIGTVSL DASTDDQSVR LHVYFRPQSP 480
  481 PDNKLSIFKM EWRDKESDGE TYIKINWEEE AAFRLLDSLK SNVPKASEAV YDYVKKYHLG 540
  541 HASSELRKSL QNDAEHAIRM VDEMNVNAQR VTRDTYQSLY KKMLAQESQS IPEKLKKMVL 600
  601 GSLVRITQKY HMAVTWLMDS VIHFLKFNRV QFPGNAGTYT VDELYTIAMR ETKKLLSQLF 660
  661 NGLGHLFSYV QDQVEKSRVI NDITFKCPFS PTPCKLKDVL LIFREDLNIL SNLGQQDINF 720
  721 TTILSDFQSF LERLLDIIEE KIECLKNNES TCVPDHINMF FKTHIPFAFK SLRENIYSVF 780
  781 SEFNDFVQSI LQEGSYKLQQ VHQYMKAFRE EYFDPSVVGW TVKYYEIEEK MVDLIKTLLA 840
  841 PLRDFYSEYS VTAADFASKM STQVEQFVSR DIREYLSMLA DINGKGREKV AELSIVVKER 900
  901 IKSWSTAVAE ITSDYLRQLH SKLQDFSDQL SGYYEKFVAE STRLIDLSIQ NYHMFLRYIA 960
  961 ELLKKLQVAT ANNVSPYLRF AQGELIITF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle