Protein Overview: DNLI1_RAT

General Information:
Name(s) found:	DNLI1_RAT [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|9050023\|gb\|AAF82585.1\|AF276774_1 DNA ligase I [Rattus norvegicus] [NCBI NR] gi\|14423666\|sp\|Q9JHY8.1\|DNLI1_RAT RecName: Full=DNA ligase 1; AltName: Full=DNA ligase I; AltName: Full=Polydeoxyribonucleotide synthase [ATP] 1 [NCBI NR] gi\|13540673\|ref\|NP_110482.1\| DNA ligase I isoform 2 [Rattus norvegicus] [NCBI NR] DNA ligase 1 OS=Rattus norvegicus GN=Lig1 PE=1 SV=1 [Swiss-Prot] DNA ligase 1 - Rattus norvegicus (Rat) [Swiss-Prot] Ensembl_locations(Chr-bp):1-72224188 DNA ligase I [hmr_yeast5_DM3-1_pombe.fasta] DNA ligase I [HMR_022704-rand.fasta] DNA ligase I [Rattus norvegicus]gi\|9050023\|gb\|AAF82585.1\| DNA ligase I [Rattus norvegicus]gi\|14423666\|sp\|Q9JHY8\|DNL1_RAT DNA ligase I (Polydeoxyribonucleotide synthase [ATP]) [nrdb_11152004_Chlamydomonas] Tax_Id=10116 DNA ligase 1 [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta] Tax_Id=10116 DNA ligase I [EBI-IPI_rat_3.13_12-01-2005_con_reversed.fasta] (NM_030855) DNA ligase I [Rattus norvegicus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta] DNA ligase 1 (DNA ligase I) (Polydeoxyribonucleotide synthase [ATP] 1) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] ligase I, DNA, ATP-dependent isoform 2 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] DNA ligase I [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Tax_Id=10116 DNA LIGASE I [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta] Tax_Id=10116 Gene_Symbol=Lig1 DNA ligase 1 [rat-ipi-250309-contam.fasta] DNA ligase 1 OS=Rattus norvegicus GN=Lig1 [011711_HMR.fasta] DNA ligase 1 OS=Rattus norvegicus GN=Lig1 PE=2 SV=1 [UNIPROT_RAT_07-21-2011_reversed.fasta]
Organism:	Rattus norvegicus
Length:	918 amino acids
Gene Ontology:
Cellular Component:	nucleus [IDA] cellular_component [ND] nucleoplasm [UNKNOWN]
Biological Process:	[NOT]V(D)J recombination [UNKNOWN] cell division [IEA] [NOT]DNA repair [UNKNOWN][IDA][IEA] DNA replication [UNKNOWN][IEA] DNA recombination [IEA] nucleotide-excision repair, DNA gap filling [UNKNOWN] cell cycle [IEA]
Molecular Function:	nucleotide binding [IEA] DNA binding [IEA] ATP binding [IEA] DNA ligase (ATP) activity [IEA] metal ion binding [IEA] DNA ligase activity [UNKNOWN][IDA] ligase activity [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRSIMSFFQ PTTTEGKAKK PEKEIPSSIR EKEPPPKVAL KERNRAVPES DSPVKRPGRK  60
   61 VAQVLSSEGE DEDEAPGTPQ VQKPVSDSKQ SSPPSPDSCP ENSPVFNCSP SMDISPSGFP 120
  121 KRRTARKQLP KRTIQDTLEE PNEDKAKAVK KRKKEDPQTP PESLTEAEEV NQKEEQVEDQ 180
  181 PTVPPEPTES PESVTLTKTE NIPMCKAGVK QKPQEEEQSK PPARGAKPLS SFFTPRKPAV 240
  241 KTEVKQEESD TPRKEETKGA PDPTNYNPSK SNYHPIEDAC WKHGQKVPFL AVARTFEKIE 300
  301 EVSARLKMVE TLSNLLRSVV ALSPTDLLPV LYLSLNRLGP PQQGLELGVG DGVLLKAVAQ 360
  361 ATGRQLESIR AEVAEKGDVG LVAENSRSTQ RLMLPSPPLT VSGVFTKFCD IARLTGSASM 420
  421 AKKMDIIKGL FVACRYSEAR FIARSLSGRL RLGLAEQSVL AALAQAGSLT PPGQEFPTVV 480
  481 VDAGKGKTAE ARKMWLEEQG MILKQTFCEV PDLDRIIPVL LEHGLESLPE HCKLSPGVPL 540
  541 KPMLAHPTRG VREVLKRFEE VDFTCEYKYY GQRAQIHVLE GGEVKIFSRN QEDNSGKYPD 600
  601 IISRIPKIKH PSVTSFILDT EAVAWDREKK QIQPFQVLTT RKRKEVDASE IQVQVCLYAF 660
  661 DLIYLNGESL ARQPLSRRRQ LLRENFVETE GEFVFATSLD TKDIEQIAEF LEQSVKDSCE 720
  721 GLMVKTLDVD ATYEIAKRSH NWLKLKKDYL EGVGDTLDLV VIGAYLGRGK RPGRYGGFLL 780
  781 AAYDEESEEL AAICKLGTGF SDEELEEHHQ NMQALLLPTP RPYVRIDGAV APNHWLDPSI 840
  841 VWEVKCADLT LSPIYRAARG MVDKEKGISL RFPRFIRVRE DKQPEQATTS DQVASLYRKQ 900
  901 SQIQNQQSSD LDSDVEDY

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.92

Protein Overview: DNLI1_RAT

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: