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Protein Overview: gi|34851364

General Information:
Name(s) found: gi|34851364 [NCBI NR]
Description(s) found:
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  • gi|34851364|ref|XP_226329.2| PREDICTED: similar to sal-like 1 [Rattus norvegicus] [NCBI NR]
  • Ensembl_locations(Chr-bp):19-23854208 [hmr_yeast5_DM3-1_pombe.fasta]
  • similar to zinc finger protein Sall1 [HMR_022704-rand.fasta]
  • similar to zinc finger protein Sall1 [Rattus norvegicus] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10116 PREDICTED: similar to Sal-like 1 [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta]
  • Tax_Id=10116 Similar to zinc finger protein Sall1 [EBI-IPI_rat_3.05_04-04-2005_origrev.fasta]
  • Tax_Id=10116 SIMILAR TO ZINC FINGER PROTEIN SALL1 [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • PREDICTED: similar to sal-like 1 [Rattus norvegicus] [nr-271106-contam.fasta]
  • Tax_Id=10116 Gene_Symbol=Sall1 sal-like 1 [rat-ipi-250309-contam.fasta]
  • Uncharacterized protein OS=Rattus norvegicus GN=Sall1 [011711_HMR.fasta]
  • Uncharacterized protein OS=Rattus norvegicus GN=Sall1 PE=4 SV=1 [UNIPROT_RAT_07-21-2011_reversed.fasta]
  • Protein Sall1 OS=Rattus norvegicus GN=Sall1 PE=4 SV=1 [Aridor_1205.fasta]
  • Protein Sall1 OS=Rattus norvegicus GN=Sall1 PE=1 SV=1 [RAT.fasta.20160308]
    • Organism: Rattus norvegicus
    Length: 1315 amino acids

    Gene Ontology:
    Cellular Component: heterochromatin [UNKNOWN]
    nucleus [UNKNOWN]
    cytoplasm [UNKNOWN]
    chromocenter [UNKNOWN]
    cellular_component [ND]
    intracellular [IEA]
    Biological Process: olfactory bulb mitral cell layer development [UNKNOWN]
    biological_process [ND]
    limb development [UNKNOWN]
    outer ear morphogenesis [UNKNOWN]
    positive regulation of transcription from RNA polymerase II promoter [UNKNOWN]
    pituitary gland development [UNKNOWN]
    embryonic digit morphogenesis [UNKNOWN]
    negative regulation of transcription from RNA polymerase II promoter [UNKNOWN]
    heart development [UNKNOWN]
    mesenchymal to epithelial transition involved in metanephros morphogenesis [UNKNOWN]
    inductive cell-cell signaling [UNKNOWN]
    gonad development [UNKNOWN]
    embryonic gut development [UNKNOWN]
    ureteric bud development [UNKNOWN]
    kidney development [UNKNOWN]
    positive regulation of Wnt receptor signaling pathway [UNKNOWN]
    adrenal gland development [UNKNOWN]
    Molecular Function: nucleic acid binding [IEA]
    zinc ion binding [IEA]
    protein binding [UNKNOWN]
    beta-catenin binding [UNKNOWN]
    transcription activator activity [UNKNOWN]
    transcription repressor activity [UNKNOWN]
    molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRRKQAKPQ HFQSDPEVAS LPRRDGDTEK GQPSRPTKSK DAHVCGRCCA EFFELSDLLL  60
   61 HKKSCTKNQL VLIVNESPAS PPKTFPPGPP SLNNPDEQMK FVASKADQED CGDLSEHKGL 120
  121 DREESMETEV PVATSSSSSN GGTLSSVTNI ATPSCHSGSS TGTSAITTSL PQLGDLTTLG 180
  181 NFSVINSNVI IENLQSTKVA VAQFSQEARC GGASGGKLLI SALMEQLLAL QQQQIHQLQL 240
  241 IEQIRHQILL LASQNADLSA SSVPSQGTLR TSANPLTTLS SHLSQQLAVA AGLAQSLASQ 300
  301 SANISGVKQL PPVQLPQSSS GTIIPPSSGP SPNVSMVTAT VPTPSSEKVA SNAGASHVSP 360
  361 PAVSASSSPA AFAISSLLSP ASNPLLPQPT PANAVFPTPL PNIATTAEDL NALSALAQQR 420
  421 KSKPPNVTAF EAKSTSDEAF FKHKCRFCAK VFGSDSALQI HLRSHTGERP FKCNICGNRF 480
  481 STKGNLKVHF QRHKEKYPHI QMNPYPVPEH LDNVPTSTGI PYGMSIPPEK PVTSWLDTKP 540
  541 VLPTLTTSVG LPLPPTLPSL TPFIKTEEPA PIPISHSAAS PQGSVKSDSG APDLATRNPS 600
  601 GVPEEAEGSA VPPFGGKGED SSVVSSIPTA GSSALNSPVA DGGAGGTTFT NPLLPLMSEQ 660
  661 FKAKFPFGGL LDSAQASETS KLQQLVENID KKATDPNECV ICHRVLSCQS ALKMHYRTHT 720
  721 GERPFKCKIC GRAFTTKGNL KTHYSVHRAM PPLRVQHSCP ICQKKFTNAV VLQQHIRMHM 780
  781 GGQIPNTPVP DNYPESMESD TGSFDEKNFD DLDNFSDENM EECPEGSIPD TPKSADASQD 840
  841 SLSSSPLPLE MSSIAALENQ MKMINAGLAE QLQASLKSVE NGSVEGDVLT NDSSSVGGDV 900
  901 ESQSSGSPAI SESTSSMQAL SPSNSTQEFH KSPNVEEKPQ RVGPGEFANG LSPTPVNGGA 960
  961 LDLTSSHAEK IIKEDSLGIL FPFRDRGKFK NTACDICGKT FACQSALDIH YRSHTKERPF1020
 1021 ICTVCSRGFS TKGNLKQHML THQMRDLPSQ LFEPSSNLGP NQNSAMIPAS SLSSLIKTEV1080
 1081 NGFVHVSPQD SKDAPTSHVP SGPLSSSATS PVLLPALPRR TPKQHYCNTC GKTFSSSSAL1140
 1141 QIHERTHTGE KPFACTICGR AFTTKGNLKV HMGTHMWNST PARRGRRLSV DGPMTFLGGN1200
 1201 PVKFPEMFQK DLAARSGSGD PSSFWNQYTA ALSNGLAMKA NEISVIQNGG IPPIPGSLGN1260
 1261 GSSSPISGLT GNVEKLGNSE PSAPLAGLEK MASSENGTNF RFTRFVEDSK EIVTS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle