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Protein Overview: gi|149033769, gi...

General Information:
Name(s) found: gi|24308468 [NCBI NR]
gi|149033769 [NCBI NR]
gi|13560703 [NCBI NR]
Description(s) found:
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  • gi|24308468|ref|NP_714943.1| pro-platelet basic protein (chemokine (C-X-C motif) ligand 7) [Rattus norvegicus] [NCBI NR]
  • gi|149033769|gb|EDL88565.1| chemokine (C-X-C motif) ligand 7, isoform CRA_b [Rattus norvegicus] [NCBI NR]
  • gi|13560703|gb|AAK30166.1|AF349115_1 CXC chemokine RTCK1 [Rattus norvegicus] [NCBI NR]
  • Ensembl_locations(Chr-bp):14-17568602 CXC chemokine RTCK1 [hmr_yeast5_DM3-1_pombe.fasta]
  • pro-platelet basic protein; neutrophil activating peptide-2 [HMR_022704-rand.fasta]
  • pro-platelet basic protein [Rattus norvegicus]gi|13560703|gb|AAK30166.1| CXC chemokine RTCK1 [Rattus norvegicus] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10116 CXC chemokine RTCK1 [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta]
  • pro-platelet basic protein [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • chemokine (C-X-C motif) ligand 7, isoform CRA_b [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • CXC chemokine RTCK1 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10116 CXC CHEMOKINE RTCK1 [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • pro-platelet basic protein (chemokine (C-X-C motif) ligand 7) [Rattus norvegicus] [NCBI-RefSeq_human-rat_na_04-07-2009_con_reversed.fasta]
  • Tax_Id=10116 Gene_Symbol=Ppbp CXC chemokine RTCK1 [rat-ipi-250309-contam.fasta]
  • CXC chemokine RTCK1 OS=Rattus norvegicus GN=Ppbp [011711_HMR.fasta]
  • CXC chemokine RTCK1 OS=Rattus norvegicus GN=Ppbp PE=2 SV=1 [UNIPROT_RAT_07-21-2011_reversed.fasta]
  • CXC chemokine RTCK1 OS=Rattus norvegicus GN=Ppbp PE=1 SV=1 [RAT.fasta.20160308]
    • Organism: Rattus norvegicus
    Length: 111 amino acids

    Gene Ontology:
    Cellular Component: platelet alpha granule lumen [UNKNOWN]
    extracellular space [IEA]
    extracellular region [UNKNOWN][IEA]
    cellular_component [ND]
    Biological Process: immune response [IEA]
    platelet formation [TAS]
    platelet activation [TAS]
    Molecular Function: chemokine activity [IEA]
    molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFRLRPTSS CTRASSLRNL QVLLSLLLVA LVPLAVGKPD NNEPFIELRC RCTNTLSGIP  60
   61 LNSISRVNVF RPGAHCDNVE VIATLKNGKE VCLDPTAPMI KKIVKKILEG Y

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle