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Protein Overview: gi|125546265

General Information:
Name(s) found: gi|125546265 [NCBI NR]
Description(s) found:
  • gi|125546265|gb|EAY92404.1| hypothetical protein OsI_14139 [Oryza sativa Indica Group] [NCBI NR]
    • Organism: Oryza sativa Indica Group
    Length: 330 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLAYPLLRL PCRCSLAAAA VPAPPRASPG PTISVSMSVD GGEGELTGRE RRKQRGERRE  60
   61 LRARDWKEEV QERLIHEPAR RRKKPPKRTW RENLNLDFLA EHGPQWWLVR VSMAPGTDYV 120
  121 DLLTKAISRR YPELSFKIYN PSIQVKKRLK NGSISTKSKP LHPGLVFLYC TLNKEVHDFI 180
  181 RDTEGCYGFI GATVGSIKRQ IKKPKPIPVE EVESIIREEK EEQERVDREF EEMENGGIVE 240
  241 SFNKPVEDSE LMLMNKIKRQ FKKPISKGGS NHNAFTPGAS VHVLSGPFEG FTGSLLEVNR 300
  301 KNKKATLQLT LFGKESFVDL DFDQIEAVDT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..103] deduced N/A No confident structure predictions are available.
    2 View Details [104..330] PSI-BLAST 29.30103 N-utilization substance G protein NusG, insert domain; N-utilization substance G protein NusG, C-terminal domain; N-utilization substance G protein NusG, N-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • structural molecule activity
    		•  0.40620600182989 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  0.40159834939744 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.12965224171975 bayes_pls_golite062009
  • transcription termination factor activity
    		•  0.00155498487487993 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle