YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|125546265
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLAYPLLRL PCRCSLAAAA VPAPPRASPG PTISVSMSVD GGEGELTGRE RRKQRGERRE  60
   61 LRARDWKEEV QERLIHEPAR RRKKPPKRTW RENLNLDFLA EHGPQWWLVR VSMAPGTDYV 120
  121 DLLTKAISRR YPELSFKIYN PSIQVKKRLK NGSISTKSKP LHPGLVFLYC TLNKEVHDFI 180
  181 RDTEGCYGFI GATVGSIKRQ IKKPKPIPVE EVESIIREEK EEQERVDREF EEMENGGIVE 240
  241 SFNKPVEDSE LMLMNKIKRQ FKKPISKGGS NHNAFTPGAS VHVLSGPFEG FTGSLLEVNR 300
  301 KNKKATLQLT LFGKESFVDL DFDQIEAVDT

Type	Start	End	Confidence
Signal Peptide	1	29	0.94
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	330	0.99