| Protein: | gi|125546265 |
| Organism: | Oryza sativa Indica Group |
| Length: | 330 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|125546265.
| Description | E-value | Query Range |
Subject Range |
|
|
220.0 | [0..36] | [328..12] |
|
Region A: Residues: [1-103] |
1 11 21 31 41 51
| | | | | |
1 MSLAYPLLRL PCRCSLAAAA VPAPPRASPG PTISVSMSVD GGEGELTGRE RRKQRGERRE 60
61 LRARDWKEEV QERLIHEPAR RRKKPPKRTW RENLNLDFLA EHG
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [104-330] |
1 11 21 31 41 51
| | | | | |
1 PQWWLVRVSM APGTDYVDLL TKAISRRYPE LSFKIYNPSI QVKKRLKNGS ISTKSKPLHP 60
61 GLVFLYCTLN KEVHDFIRDT EGCYGFIGAT VGSIKRQIKK PKPIPVEEVE SIIREEKEEQ 120
121 ERVDREFEEM ENGGIVESFN KPVEDSELML MNKIKRQFKK PISKGGSNHN AFTPGASVHV 180
181 LSGPFEGFTG SLLEVNRKNK KATLQLTLFG KESFVDLDFD QIEAVDT
|
| Detection Method: | |
| Confidence: | 29.30103 |
| Match: | 1m1gA |
| Description: | N-utilization substance G protein NusG, insert domain; N-utilization substance G protein NusG, C-terminal domain; N-utilization substance G protein NusG, N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| structural molecule activity | 0.40620600182989 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.40159834939744 | bayes_pls_golite062009 |
| transcription regulator activity | 0.12965224171975 | bayes_pls_golite062009 |
| transcription termination factor activity | 0.00155498487487993 | bayes_pls_golite062009 |
