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Protein Overview: gi|114596816

General Information:
Name(s) found: gi|114596816 [NCBI NR]
Description(s) found:
Found 3 descriptions.
SHOW ALL
  • gi|114596816|ref|XP_001153846.1| PREDICTED: chloride channel 3 isoform 3 [Pan troglodytes] [NCBI NR]
    • Organism: Pan troglodytes
    Length: 866 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESEQLFHRG YYRNSYNSIT SASSDEELLD GAGVIMDFQT SEDDNLLDGD TAVGTHYTMT  60
   61 NGGSINSSTH LLDLLDEPIP GVGTYDDFHT IDWVREKCKD RERHRRINSK KKESAWEMTK 120
  121 SLYDAWSGWL VVTLTGLASG ALAGLIDIAA DWMTDLKEGI CLSALWYNHE QCCWGSNETT 180
  181 FEERDKCPQW KTWAELIIGQ AEGPGSYIMN YIMYIFWALS FAFLAVSLVK VFAPYACGSG 240
  241 IPEIKTILSG FIIRGYLGKW TLMIKTITLV LAVASGLSLG KEGPLVHVAC CCGNIFSYLF 300
  301 PKYSTNEAKK REVLSAASAA GVSVAFGAPI GGVLFSLEEV SYYFPLKTLW RSFFAALVAA 360
  361 FVLRSINPFG NSRLVLFYVE YHTPWYLFEL FPFILLGVFG GLWGAFFIRA NIAWCRRRKS 420
  421 TKFGKYPVLE VIIVAAITAV IAFPNPYTRL NTSELIKELF TDCGPLESSS LCDYRNDMNA 480
  481 SKIVDDIPDR PAGIGVYSAI WQLCLALIFK IIMTVFTFGI KVPSGLFIPS MAIGAIAGRI 540
  541 VGIAVEQLAY YHHDWFIFKE WCEVGADCIT PGLYAMVGAA ACLGGVTRMT VSLVVIVFEL 600
  601 TGGLEYIVPL MAAVMTSKWV GDAFGREGIY EAHIRLNGYP FLDAKEEFTH TTLAADVMRP 660
  661 RRNDPPLAVL TQDNMTVDDI ENMINETSYN GFPVIMSKES QRLVGFALRR DLTIAIESAR 720
  721 KKQEGIVGSS RVCFAQHTPS LPAESPRPLK LRSILDMSPF TVTDHTPMEI VVDIFRKLGL 780
  781 RQCLVTHNGI VLGIITKKNI LEHLEQLKQH VEPLAPPWHY NKKRYPPAYG PDGKPRPRFN 840
  841 NVQLNLTDEE REETEEEVYL LNSTTL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..113] deduced N/A No confident structure predictions are available.
    2 View Details [114..590] PSI-BLAST 52.0 Clc chloride channel
    3 View Details [591..643] FFAS03 1.86 Clc chloride channel
    4 View Details [644..866] PSI-BLAST 19.39794 No description for 2j9lA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • anion channel activity
    		•  6.77290758049983 bayes_pls_golite062009
  • chloride channel activity
    		•  6.77290758049983 bayes_pls_golite062009
  • anion transmembrane transporter activity
    		•  6.08111514985329 bayes_pls_golite062009
  • voltage-gated chloride channel activity
    		•  5.99544422864122 bayes_pls_golite062009
  • voltage-gated anion channel activity
    		•  5.99544422864122 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  5.07840957725271 bayes_pls_golite062009
  • ion channel activity
    		•  4.93164650815682 bayes_pls_golite062009
  • substrate-specific channel activity
    		•  4.81149777353187 bayes_pls_golite062009
  • channel activity
    		•  4.78965126968592 bayes_pls_golite062009
  • passive transmembrane transporter activity
    		•  4.78965126968592 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  4.67227438984104 bayes_pls_golite062009
  • voltage-gated ion channel activity
    		•  4.27956097534048 bayes_pls_golite062009
  • voltage-gated channel activity
    		•  4.255638017629 bayes_pls_golite062009
  • gated channel activity
    		•  4.1072949331811 bayes_pls_golite062009
  • transporter activity
    		•  2.94995161862691 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  2.84443650880263 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  2.82470397063503 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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