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Protein Overview: gi|125541426

General Information:
Name(s) found: gi|125541426 [NCBI NR]
Description(s) found:
  • gi|125541426|gb|EAY87821.1| hypothetical protein OsI_09239 [Oryza sativa Indica Group] [NCBI NR]
    • Organism: Oryza sativa Indica Group
    Length: 437 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVLEDDMFP STPGKVKIER ATAMNRQLHR CFASTSTMFL WALFLVAMTA SYLSFQSFVD  60
   61 TSSKYFAASW GGLHWERQIR ASAAPRRPPG SAAGAGMSVL VTGAAGFVGT HCSLALRKRG 120
  121 DGVVGIDNFN SYYDPSLKKA RRSLLASHGV FVIEGDINDG RLLAKLFDVV PFTHVLHLAA 180
  181 QAGVRYAMEN PASYVHSNIA GLVTLLEACK DADPQPAIVW ASSSSVYGLN DKVPFTESDR 240
  241 TDQPASLYAA TKKAGEEITH TYNHIYGLSI TGLRFFTVYG PWGRPDMAYF SFTRNILQGK 300
  301 PITVYRGKNR VDLARDFTYI DDIVKGCLGS LDTAGKSTGT GGKKRGPAPY RIFNLGNTSP 360
  361 VTVPNLVSIL EKHLRVKAKK NVVEMPGNGD VPFTHANISL ARQQLGYKPT TNLDVGLKKF 420
  421 VKWYLSYYGY TRGSKNL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..96] PSI-BLAST 16.39794 No description for 2fr0A was found.
    2 View Details [97..437] PSI-BLAST 80.0 dTDP-glucose 4,6-dehydratase (RmlB)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • UDP-glucose 4-epimerase activity
    		•  2.13934644118967 bayes_pls_golite062009
  • catalytic activity
    		•  1.79741889688267 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
    		•  1.03956654822048 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.868888700854563 bayes_pls_golite062009
  • binding
    		•  0.835119783772935 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  0.82673050487418 bayes_pls_golite062009
  • DNA binding
    		•  0.790382977752475 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.613310508772122 bayes_pls_golite062009
  • transcription factor activity
    		•  0.11102650759187 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle