| Protein: | gi|125541426 |
| Organism: | Oryza sativa Indica Group |
| Length: | 437 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|125541426.
| Description | E-value | Query Range |
Subject Range |
|
|
366.0 | [0..1] | [433..1] |
|
Region A: Residues: [1-96] |
1 11 21 31 41 51
| | | | | |
1 MRVLEDDMFP STPGKVKIER ATAMNRQLHR CFASTSTMFL WALFLVAMTA SYLSFQSFVD 60
61 TSSKYFAASW GGLHWERQIR ASAAPRRPPG SAAGAG
|
| Detection Method: |  |
| Confidence: | 16.39794 |
| Match: | 2fr0A |
| Description: | No description for 2fr0A was found. |
|
Region A: Residues: [97-437] |
1 11 21 31 41 51
| | | | | |
1 MSVLVTGAAG FVGTHCSLAL RKRGDGVVGI DNFNSYYDPS LKKARRSLLA SHGVFVIEGD 60
61 INDGRLLAKL FDVVPFTHVL HLAAQAGVRY AMENPASYVH SNIAGLVTLL EACKDADPQP 120
121 AIVWASSSSV YGLNDKVPFT ESDRTDQPAS LYAATKKAGE EITHTYNHIY GLSITGLRFF 180
181 TVYGPWGRPD MAYFSFTRNI LQGKPITVYR GKNRVDLARD FTYIDDIVKG CLGSLDTAGK 240
241 STGTGGKKRG PAPYRIFNLG NTSPVTVPNL VSILEKHLRV KAKKNVVEMP GNGDVPFTHA 300
301 NISLARQQLG YKPTTNLDVG LKKFVKWYLS YYGYTRGSKN L
|
| Detection Method: | |
| Confidence: | 80.0 |
| Match: | 1g1aA |
| Description: | dTDP-glucose 4,6-dehydratase (RmlB) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| UDP-glucose 4-epimerase activity | 2.13934644118967 | bayes_pls_golite062009 |
| catalytic activity | 1.79741889688267 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on CH-OH group of donors | 1.03956654822048 | bayes_pls_golite062009 |
| nucleic acid binding | 0.868888700854563 | bayes_pls_golite062009 |
| binding | 0.835119783772935 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 0.82673050487418 | bayes_pls_golite062009 |
| DNA binding | 0.790382977752475 | bayes_pls_golite062009 |
| transcription regulator activity | 0.613310508772122 | bayes_pls_golite062009 |
| transcription factor activity | 0.11102650759187 | bayes_pls_golite062009 |
