Protein Overview: CPLX2_RAT

General Information:
Name(s) found:	CPLX2_RAT [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|51316993\|sp\|P84087.1\|CPLX2_RAT RecName: Full=Complexin-2; AltName: Full=Complexin II; Short=CPX II; AltName: Full=Synaphin-1 [NCBI NR] gi\|16758744\|ref\|NP_446330.1\| complexin 2 [Rattus norvegicus] [NCBI NR] gi\|149039945\|gb\|EDL94061.1\| complexin 2 [Rattus norvegicus] [NCBI NR] gi\|1040919\|gb\|AAC52271.1\| complexin II [NCBI NR] gi\|1015333\|dbj\|BAA11096.1\| synaphin 1 [Rattus norvegicus] [NCBI NR] Complexin-2 OS=Rattus norvegicus GN=Cplx2 PE=1 SV=1 [Swiss-Prot] (P84087) Complexin 2 (Synaphin 1) [Swiss-Prot] Ensembl_locations(Chr-bp):15_random-1494827 Complexin 2 [hmr_yeast5_DM3-1_pombe.fasta] complexin 2 [HMR_022704-rand.fasta] complexin 2 [Rattus norvegicus]gi\|6753508\|ref\|NP_034076.1\| complexin 2 [Mus musculus]gi\|5729783\|ref\|NP_006641.1\| complexin 2 [Homo sapiens]gi\|27805861\|ref\|NP_776708.1\| complexin 2 [Bos taurus]gi\|975631\|dbj\|BAA09434.1\| synaphin [Bos taurus]gi\|1040921\| [nrdb_11152004_Chlamydomonas] Tax_Id=10116 Complexin-2 [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta] (NM_053878) complexin 2 [Rattus norvegicus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta] Tax_Id=10116 Complexin 2 [EBI-IPI_rat_3.08_07-12-2005_origrev_con.fasta] Complexin-2 (Complexin II) (CPX II) (Synaphin-1) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] complexin 2 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] synaphin 1 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] complexin II [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Tax_Id=10116 COMPLEXIN 2 [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta] Tax_Id=10116 Gene_Symbol=Cplx2 Complexin-2 [rat-ipi-250309-contam.fasta] Complexin-2 OS=Rattus norvegicus GN=Cplx2 [011711_HMR.fasta]
Organism:	Rattus norvegicus
Length:	134 amino acids
Gene Ontology:
Cellular Component:	nucleus [IEA] dendrite [IDA] cytoplasm [IEA] cytosol [IEA] cell junction [IEA] SNARE complex [IDA] neuronal cell body [IDA] synapse [IDA]
Biological Process:	neurotransmitter transport [IEA] vesicle docking during exocytosis [TAS] synaptic vesicle exocytosis [IDA] mast cell degranulation [IEA]
Molecular Function:	syntaxin-1 binding [IDA] SNARE binding [IDA]

Sequence:
Sequence: [PDR BLAST] [ProtParam]	1 11 21 31 41 51 \| \| \| \| \| \| 1 MDFVMKQALG GATKDMGKML GGEEEKDPDA QKKEEERQEA LRQQEEERKA KHARMEAERE 60 61 KVRQQIRDKY GLKKKEEKEA EEKAALEQPC EGSLTRPKKA IPAGCGDEEE EEEESILDTV 120 121 LKYLPGPLQD MFKK

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

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No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..134]	Pfam	74.958607	No description for PF05835.3 was found. No confident structure predictions are available.

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle