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Protein Overview: RS27A_RAT

General Information:
Name(s) found: RS27A_RAT [Swiss-Prot]
Description(s) found:
Found 22 descriptions.
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  • Ubiquitin-40S ribosomal protein S27a OS=Rattus norvegicus GN=Rps27a PE=1 SV=2 [Swiss-Prot]
    • Organism: Rattus norvegicus
    Length: 156 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    cytoplasm [IEA]
    cytosolic small ribosomal subunit [UNKNOWN][IDA]
    cytosol [UNKNOWN]
    small ribosomal subunit [UNKNOWN]
    ribosome [IEA]
    intracellular [IEA]
    Biological Process: positive regulation of transcription [IEA]
    translational elongation [UNKNOWN]
    translation [IEA]
    protein ubiquitination [IEA]
    Molecular Function: protein binding [IEA]
    structural constituent of ribosome [UNKNOWN][IEA]
    transcription regulator activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQIFVKTLTG KTITLEVEPS DTIENVKAKI QDKEGIPPDQ QRLIFAGKQL EDGRTLSDYN  60
   61 IQKESTLHLV LRLRGGAKKR KKKSYTTPKK NKHKRKKVKL AVLKYYKVDE NGKISRLRRE 120
  121 CPSDECGAGV FMGSHFDRHY CGKCCLTYCF NKPEDK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..93] PSI-BLAST 38.69897 No description for 2ojrA was found.
    2 View Details [94..156] MSA 11.086996 View MSA. Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle