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Protein Overview: gi|133728614, gi...

General Information:
Name(s) found: gi|254829045 [NCBI NR]
gi|153175901 [NCBI NR]
gi|133728614 [NCBI NR]
Description(s) found:
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  • gi|254829045|ref|ZP_05233732.1| 30S ribosomal protein S9 [Listeria monocytogenes FSL N3-165] [NCBI NR]
  • gi|153175901|ref|ZP_01931160.1| hypothetical protein LMIG_00011 [Listeria monocytogenes FSL N3-165] [NCBI NR]
  • gi|133728614|gb|EBA30312.1| hypothetical protein LMIG_00011 [Listeria monocytogenes FSL N3-165] [NCBI NR]
    • Organism: Listeria monocytogenes FSL N3-165
    Length: 130 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQVQYYGTG RRKSSVARVR LVPGDGKIVI NNRDWEDYIP FAALREVIKQ PLVATETLGN  60
   61 YDVLVNVHGG GYTGQAGAIR HGVARALLQV APEYRPALKS AGLLTRDSRM KERKKPGLKG 120
  121 ARRAPQFSKR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..130] PSI-BLAST 47.0 No description for 1vs5I was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  7.32829196949019 bayes_pls_golite062009
  • structural molecule activity
    		•  6.75880680396215 bayes_pls_golite062009
  • 3'-5'-exoribonuclease activity
    		•  1.56111033008721 bayes_pls_golite062009
  • RNA binding
    		•  1.40868766468494 bayes_pls_golite062009
  • exoribonuclease activity, producing 5'-phosphomonoesters
    		•  1.35935222635763 bayes_pls_golite062009
  • exoribonuclease activity
    		•  1.31205157616894 bayes_pls_golite062009
  • 3'-5' exonuclease activity
    		•  1.10842504252923 bayes_pls_golite062009
  • catalytic activity
    		•  0.878454819018611 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.555181608481691 bayes_pls_golite062009
  • binding
    		•  0.478154009944658 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.368412900600617 bayes_pls_golite062009
  • ribonuclease activity
    		•  0.19921800066954 bayes_pls_golite062009
  • DNA binding
    		•  0.0880977286684361 bayes_pls_golite062009
  • mRNA binding
    		•  0.0491645692672305 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  6.9430052008157E-5 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle