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Protein Overview: SZ05_MOUSE, CXCL...

General Information:
Name(s) found: SZ05_MOUSE [Swiss-Prot]
SCYB5_MOUSE [Swiss-Prot]
CXCL5_MOUSE [Swiss-Prot]
Description(s) found:
Found 34 descriptions.
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  • (P50228) Small inducible cytokine B5 precursor (CXCL5) (Cytokine LIX) [Contains: GCP-2(1-78); GCP-2(9-78)] [Swiss-Prot]
  • Small-inducible cytokine B5 precursor - Mus musculus (Mouse) [Swiss-Prot]
  • C-X-C motif chemokine 5 OS=Mus musculus GN=Cxcl5 PE=1 SV=1 [Swiss-Prot]
    • Organism: Mus musculus
    Length: 132 amino acids

    Gene Ontology:
    Cellular Component: extracellular space [IEA]
    extracellular region [IEA]
    Biological Process: chemotaxis [IEA]
    inflammatory response [UNKNOWN]
    immune response [IEA]
    cytokine production [UNKNOWN]
    Molecular Function: cytokine activity [IEA]
    chemokine activity [UNKNOWN]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLQLRSSAH IPSGSSSPFM RMAPLAFLLL FTLPQHLAEA APSSVIAATE LRCVCLTVTP  60
   61 KINPKLIANL EVIPAGPQCP TVEVIAKLKN QKEVCLDPEA PVIKKIIQKI LGSDKKKAKR 120
  121 NALAVERTAS VQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..132] PSI-BLAST 16.221849 CRYSTAL STRUCTURE OF CONNECTIVE TISSUE ACTIVATING PEPTIDE-III(CTAP-III) COMPLEXED WITH POLYVINYLSULFONIC ACID

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.3900020421144 bayes_pls_golite062009
  • protein binding
    		•  1.08080878723934 bayes_pls_golite062009
  • receptor binding
    		•  0.76867241822245 bayes_pls_golite062009
  • cytokine activity
    		•  0.53309192942479 bayes_pls_golite062009
  • G-protein-coupled receptor binding
    		•  0.32020721127886 bayes_pls_golite062009
  • chemokine activity
    		•  0.26786878228995 bayes_pls_golite062009
  • chemokine receptor binding
    		•  0.26786878228995 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle