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Protein Overview: HXB7_MOUSE

General Information:
Name(s) found: HXB7_MOUSE [Swiss-Prot]
Description(s) found:
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  • gi|861031|emb|CAA68494.1| 2.3 gene product [Mus musculus] [NCBI NR]
  • pir||WJMSX2 homeotic protein Hox B7 - mouse [NCBI NR]
  • gi|51390|emb|CAA29934.1| unnamed protein product [Mus musculus] [NCBI NR]
  • ref|NP_034590.1| homeo box B7 [Mus musculus] [NCBI NR]
  • gi|123256|sp|P09024|HXB7_MOUSE Homeobox protein Hox-B7 (Hox-2.3) (MUB1) (MH-22B) [NCBI NR]
  • (P09024) Homeobox protein Hox-B7 (Hox-2.3) (MUB1) (MH-22B) [Swiss-Prot]
  • Ensembl_locations(Chr-bp):11-97121747 Homeobox protein Hox-B7 [hmr_yeast5_DM3-1_pombe.fasta]
  • homeo box B7 [HMR_022704-rand.fasta]
  • homeo box B7 [Mus musculus]gi|123256|sp|P09024|HXB7_MOUSE Homeobox protein Hox-B7 (Hox-2.3) (MUB1) (MH-22B)gi|72244|pir||WJMSX2 homeotic protein Hox B7 - mousegi|861031|emb|CAA68494.1| 2.3 gene product [Mus musculus]gi|51390|emb|CAA29934.1| unnamed pr [nrdb_11152004_Chlamydomonas]
  • Homeobox protein Hox-B7 [ipi.MOUSE.v3.06.fasta]
  • Tax_Id=10090 Homeobox protein Hox-B7 [EBI-IPI_mouse_3.17_05-10-2006_con_reversed.fasta]
  • (NM_010460) homeo box B7 [Mus musculus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • homeo box B7 [Mus musculus] [mouse-NCBI-010306_contam_rand.fasta]
  • 2.3 gene product [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • unnamed protein product [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10090 HOMEOBOX PROTEIN HOX-B7 [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
    • Organism: Mus musculus
    Length: 217 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLYYANAL FSKYPAASSV FAPGAFPEQT SCAFASNPQR PGYGAGPGAP FSASVQGLYS  60
   61 GGGAMAGQSA AGVYAAGYGL EPSSFNMHCA PFEQNLSGVC PGDAAKAGGA KEQRDSDLAA 120
  121 ESNFRIYPWM RSSGPDRKRG RQTYTRYQTL ELEKEFHYNR YLTRRRRIEI AHTLCLTERQ 180
  181 IKIWFQNRRM KWKKENKTSG PGTTGQDKAE GEEEEEE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..119] MSA 4.285997 View MSA. No confident structure predictions are available.
    2 View Details [120..217] PSI-BLAST 25.221849 DETERMINATION OF THE THREE-DIMENSIONAL STRUCTURE OF THE ANTENNAPEDIA HOMEODOMAIN FROM DROSOPHILA IN SOLUTION BY 1H NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • transcription regulator activity
    		•  5.13863038737912 bayes_pls_golite062009
  • DNA binding
    		•  4.66369707598026 bayes_pls_golite062009
  • nucleic acid binding
    		•  4.51452285155271 bayes_pls_golite062009
  • transcription factor activity
    		•  4.06706589695599 bayes_pls_golite062009
  • transcription repressor activity
    		•  3.55154985983449 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  3.5139760613123 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  3.16896789933192 bayes_pls_golite062009
  • transcription activator activity
    		•  3.10621734076555 bayes_pls_golite062009
  • binding
    		•  3.02779747447702 bayes_pls_golite062009
  • protein binding
    		•  1.88087411289001 bayes_pls_golite062009
  • specific RNA polymerase II transcription factor activity
    		•  1.73068440195944 bayes_pls_golite062009
  • chromatin binding
    		•  1.68956710349366 bayes_pls_golite062009
  • transcription corepressor activity
    		•  1.49423102874486 bayes_pls_golite062009
  • transcription factor binding
    		•  1.40653841901929 bayes_pls_golite062009
  • transcription cofactor activity
    		•  0.84983974758882 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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