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Protein Overview: RPC9_MOUSE

General Information:
Name(s) found: RPC9_MOUSE [Swiss-Prot]
Description(s) found:
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  • gi|6681011|ref|NP_031787.1| calcitonin gene-related peptide-receptor component protein [Mus musculus] [NCBI NR]
  • gi|4325066|gb|AAD17244.1| calcitonin gene-related peptide receptor component protein [Mus musculus] [NCBI NR]
  • gi|2599066|gb|AAB84046.1| CGRP-receptor component protein; CGRP-RCP [Mus musculus] [NCBI NR]
  • gi|20532032|sp|O35427.1|RPC9_MOUSE RecName: Full=DNA-directed RNA polymerase III subunit RPC9; Short=RNA polymerase III subunit C9; AltName: Full=Calcitonin gene-related peptide-receptor component protein; Short=CGRP-receptor component protein; Short=CGRP [NCBI NR]
  • gi|15215134|gb|AAH12676.1| Calcitonin gene-related peptide-receptor component protein [Mus musculus] [NCBI NR]
  • gi|148687532|gb|EDL19479.1| calcitonin gene-related peptide-receptor component protein, isoform CRA_a [Mus musculus] [NCBI NR]
  • DNA-directed RNA polymerase III subunit RPC9 OS=Mus musculus GN=Crcp PE=2 SV=1 [Swiss-Prot]
  • Calcitonin gene-related peptide-receptor component protein (CGRP-receptor component protein) (CGRP-RCP) (CGRPRCP) - Mus musculus (Mouse) [Swiss-Prot]
  • Ensembl_locations(Chr-bp):5-127423757 Calcitonin gene-related peptide-receptor component protein [hmr_yeast5_DM3-1_pombe.fasta]
  • calcitonin gene-related peptide-receptor component protein [HMR_022704-rand.fasta]
  • Calcitonin gene-related peptide-receptor component protein [ipi.MOUSE.v3.06.fasta]
  • calcitonin gene-related peptide-receptor component protein [Mus musculus]gi|15215134|gb|AAH12676.1| Calcitonin gene-related peptide-receptor component protein [Mus musculus]gi|20532032|sp|O35427|CRCP_MOUSE Calcitonin gene-related peptide-receptor compon [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10090 Calcitonin gene-related peptide-receptor component protein [EBI-IPI_mouse_3.17_05-10-2006_con_reversed.fasta]
  • (NM_007761) calcitonin gene-related peptide-receptor component protein [Mus musculus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • calcitonin gene-related peptide-receptor component protein [Mus musculus] [mouse-NCBI-010306_contam_rand.fasta]
  • DNA-directed RNA polymerase III subunit RPC9 (RNA polymerase III subunit C9) (Calcitonin gene-related peptide-receptor component protein) (CGRP-receptor component protein) (CGRP-RCP) (CGRPRCP) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • calcitonin gene-related peptide-receptor component protein, isoform CRA_a [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Calcitonin gene-related peptide-receptor component protein [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • calcitonin gene-related peptide receptor component protein [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • CGRP-receptor component protein; CGRP-RCP [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10090 CALCITONIN GENE-RELATED PEPTIDE-RECEPTOR COMPONENT PROTEIN [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=10090 Gene_Symbol=Crcp DNA-directed RNA polymerase III subunit RPC9 [mouse-ipi-250309-contam.fasta]
  • Calcitonin gene-related peptide-receptor component protein (CGRP-receptor component protein) (CGRP-RCP) (CGRPRCP) [nr-271106-contam.fasta]
  • Tax_Id=10090 Gene_Symbol=Crcp Calcitonin gene-related peptide-receptor component protein [zeeyong.fasta]
  • Tax_Id=10090 Gene_Symbol=Crcp DNA-directed RNA polymerase III subunit RPC9 ENSMUSG00000025532 IPI00130708 IPI00875464 [IPIxENS.MOUSE_plus_REVERSE.fasta]
  • DNA-directed RNA polymerase III subunit RPC9 [Mus musculus] [NCBI-RefSeq_mouse_na_05-17-2010_reversed.fasta]
  • IPI:IPI00130708.1|SWISS-PROT:O35427|ENSEMBL:ENSMUSP00000026608|REFSEQ:NP_031787|VEGA:OTTMUSP00000026007 Tax_Id=10090 Gene_Symbol=Crcp DNA-directed RNA polymerase III subunit RPC9 [ipi.MOUSE.fasta.20090209]
  • DNA-directed RNA polymerase III subunit RPC9 OS=Mus musculus GN=Crcp [011711_HMR.fasta]
  • sp|O35427|RPC9_MOUSE DNA-directed RNA polymerase III subunit RPC9 OS=Mus musculus GN=Crcp PE=2 SV=1 [uniprot.sptr.mouse.20130102]
    • Organism: Mus musculus
    Length: 148 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVKDANAAL LSNYEVFQLL TDLKEQRKES GKNKHSAGQQ NLNAITYETL KYISKTPCRN  60
   61 QSPAIVQEFL TAMKSHKLTK AEKLQLLNHR PMTAVEIQLM VEESEERLTE EQIEALLHTV 120
  121 TSILPAGPED EQSKSTSNDV AMEEEEPA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..148] PSI-BLAST 30.154902 Subunits Rpb4 and Rpb7 of human RNA polymerase II

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • DNA-directed RNA polymerase activity
    		•  8.43501887532465 bayes_pls_golite062009
  • RNA polymerase activity
    		•  8.43501887532465 bayes_pls_golite062009
  • nucleotidyltransferase activity
    		•  5.88847066010291 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  4.49709494019709 bayes_pls_golite062009
  • transferase activity
    		•  3.42143089321218 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.4721848902664 bayes_pls_golite062009
  • binding
    		•  1.9212205923594 bayes_pls_golite062009
  • catalytic activity
    		•  1.17990683373825 bayes_pls_golite062009
  • histone acetyltransferase activity
    		•  0.8583308140751 bayes_pls_golite062009
  • lysine N-acetyltransferase activity
    		•  0.8583308140751 bayes_pls_golite062009
  • protein binding
    		•  0.497114544861103 bayes_pls_golite062009
  • ribonuclease activity
    		•  0.35631508447468 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle