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Protein Overview: asm-3

General Information:
Name(s) found: asm-3 / CE39794 [WormBase]
Description(s) found:
Found 12 descriptions.
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  • WBGene00000213 locus:asm-3 status:Partially_confirmed UniProt:G8JY85 protein_id:CCD69085.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 545 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    vacuole [IEALink to PubMed article]
    Biological Process: sphingomyelin catabolic process [IEALink to PubMed article]
    Molecular Function: endopolyphosphatase activity [IEALink to PubMed article]
    sphingomyelin phosphodiesterase activity [IEALink to PubMed article]
    hydrolase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIAVFICET FHIEDNDVCN FIISDFSDEF MYVIKQILVT PHQLCGLLMK NDCGDFVDPL  60
   61 ATIWNMTIPG NQPPFVPKQV VPPGNPTLRA LHLTDLHVDM FYTVGLEADC GTPQCCRPQD 120
  121 MNVEIVENGD VKQPAGPWGS VGSCDTPYWL LTNMLQNIAS TAGKLDYIMV SGDLVSHTVW 180
  181 AYTPETHSFM VKNLSDTIRS YFPKTPVYFA VGNHEGVPVD NIAPHFTPKK YHMDWLYKAM 240
  241 SNAWQGWIPA DQEKSLEYNG CYMKKIYDGL RMISLNNVYG DRINFWLYIN QTDPDGTLQW 300
  301 LINQLQDAEN VGDKVHIVAH IPGSDGEALE GYALNYYKII NRYANTVVGQ FFGHTHSEKF 360
  361 YMMYANPDDY KSTPTNVVYS APSVTPYSDY FPAYRIYTID GVHKGSTYQV IDYEEWFFNL 420
  421 TSNNANPTNV KWEVLYQSAN MEYGLKGQIP TEYNQMIERM KTDDSLFNKY YENHNRRSIY 480
  481 DGRAPCNDQQ CRNGYLCDAR QFHQTQQLCT DLEGGIQKPE PKKNKYSARF ATSNERRRGK 540
  541 EECKI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..83] deduced N/A No confident structure predictions are available.
    2 View Details [84..545] PSI-BLAST 37.522879 Purple acid phosphatase, N-terminal domain; Plant purple acid phosphatase, catalytic domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • phosphoric ester hydrolase activity
    		•  3.05960970003903 bayes_pls_golite062009
  • hydrolase activity
    		•  2.06280293513737 bayes_pls_golite062009
  • catalytic activity
    		•  1.39852585255405 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  1.04077570202244 bayes_pls_golite062009
  • phosphatase activity
    		•  0.76188635342041 bayes_pls_golite062009
  • phosphoprotein phosphatase activity
    		•  0.744264552706022 bayes_pls_golite062009
  • protein serine/threonine phosphatase activity
    		•  0.631630849060451 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle