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Protein Overview: gi|4239965, gi|3...

General Information:
Name(s) found: gi|6755893 [NCBI NR]
gi|4239965 [NCBI NR]
gi|38511693 [NCBI NR]
gi|2358085 [NCBI NR]
gi|148681590 [NCBI NR]
gi|12843002 [NCBI NR]
gi|12833488 [NCBI NR]
Description(s) found:
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  • gi|6755893|ref|NP_035776.1| trypsin 4 [Mus musculus] [NCBI NR]
  • gi|4239965|dbj|BAA74761.1| pancreatic trypsin [Mus musculus] [NCBI NR]
  • gi|38511693|gb|AAH61135.1| Trypsin 4 [Mus musculus] [NCBI NR]
  • gi|2358085|gb|AAB69056.1| trypsinogen 8 [Mus musculus] [NCBI NR]
  • gi|148681590|gb|EDL13537.1| mCG15085 [Mus musculus] [NCBI NR]
  • gi|12843002|dbj|BAB25821.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|12833488|dbj|BAB22542.1| unnamed protein product [Mus musculus] [NCBI NR]
  • Ensembl_locations(Chr-bp):6-41298243;6-41298243 Pancreatic trypsin [hmr_yeast5_DM3-1_pombe.fasta]
  • trypsin 4 [HMR_022704-rand.fasta]
  • Pancreatic trypsin [ipi.MOUSE.v3.06.fasta]
  • trypsin 4 [Mus musculus]gi|38511693|gb|AAH61135.1| Trypsin 4 [Mus musculus]gi|2358085|gb|AAB69056.1| trypsinogen 8 [Mus musculus]gi|4239965|dbj|BAA74761.1| pancreatic trypsin [Mus musculus]gi|12843002|dbj|BAB25821.1| unnamed protein product [Mus muscu [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10090 Pancreatic trypsin [EBI-IPI_mouse_3.17_05-10-2006_con_reversed.fasta]
  • (NM_011646) trypsin 4 [Mus musculus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • trypsin 4 [Mus musculus] [mouse-NCBI-010306_contam_rand.fasta]
  • mCG15085 [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • unnamed protein product [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Trypsin 4 [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • trypsinogen 8 [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • pancreatic trypsin [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10090 PANCREATIC TRYPSIN [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=10090 Gene_Symbol=Try4;1810049H19Rik trypsin 4 [mouse-ipi-250309-contam.fasta]
  • Tax_Id=10090 Gene_Symbol=Try4;1810049H19Rik Pancreatic trypsin [zeeyong.fasta]
  • IPI:IPI00128108.1|TREMBL:Q9R0T7|ENSEMBL:ENSMUSP00000031913|REFSEQ:NP_035776|VEGA:OTTMUSP00000033368 Tax_Id=10090 Gene_Symbol=Try4;1810049H19Rik trypsin 4 [ipi.MOUSE.fasta.20090209]
  • MCG15085 OS=Mus musculus GN=Try4 [011711_HMR.fasta]
  • Tax_Id=10090 Gene_Symbol=1810049H19Rik;Try4 trypsin 4 [ipi.MOUSE.v3.53-HA-DAT.fasta]
  • Tax_Id=10090 Gene_Symbol=Try4 trypsin 4 [EBI-IPI_mouse_2_08-18-2011_reversed.fasta]
  • MCG15085 OS=Mus musculus GN=Try4 PE=2 SV=1 [uniprot-mouse-120502.fasta]
  • tr|Q9R0T7|Q9R0T7_MOUSE MCG15085 OS=Mus musculus GN=Try4 PE=2 SV=1 [uniprot.sptr.mouse.20130102]
  • MCG15085 OS=Mus musculus GN=Try4 PE=1 SV=1 [MOUSE.fasta.20160308]
    • Organism: Mus musculus
    Length: 246 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRALLFLALV GAAVAFPVDD DDKIVGGYTC RENSVPYQVS LNSGYHFCGG SLINDQWVVS  60
   61 AAHCYKSRIQ VRLGEHNINV LEGNEQFVNS AKIIKHPNFN SRTLNNDIML IKLASPVTLN 120
  121 ARVATVALPS SCAPAGTQCL ISGWGNTLSF GVNNPDLLQC LDAPLLPQAD CEASYPGKIT 180
  181 NNMICVGFLE GGKDSCQGDS GGPVVCNGQL QGIVSWGYGC ALKDNPGVYT KVCNYVDWIQ 240
  241 NTIAAN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run HIR2 No Comments Green EM, et al (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..246] PSI-BLAST 82.09691 Trypsin(ogen)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • peptidase activity
    		•  5.91209560688646 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  5.52773635813967 bayes_pls_golite062009
  • serine hydrolase activity
    		•  5.5105092190926 bayes_pls_golite062009
  • serine-type peptidase activity
    		•  5.49703869306079 bayes_pls_golite062009
  • serine-type endopeptidase activity
    		•  5.39623690248556 bayes_pls_golite062009
  • endopeptidase activity
    		•  5.32070018460528 bayes_pls_golite062009
  • hydrolase activity
    		•  4.40346950809697 bayes_pls_golite062009
  • fucose binding
    		•  3.5000591397073 bayes_pls_golite062009
  • glycosaminoglycan binding
    		•  2.01328116441763 bayes_pls_golite062009
  • calcium-dependent protein binding
    		•  1.96509840108953 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.73928761064649 bayes_pls_golite062009
  • DNA binding
    		•  1.61536775064425 bayes_pls_golite062009
  • heparin binding
    		•  1.48285358055737 bayes_pls_golite062009
  • thrombospondin receptor activity
    		•  1.44312413043539 bayes_pls_golite062009
  • catalytic activity
    		•  1.40927913545237 bayes_pls_golite062009
  • polysaccharide binding
    		•  1.34665327732001 bayes_pls_golite062009
  • binding
    		•  1.30738106455622 bayes_pls_golite062009
  • protein binding
    		•  1.30414885212044 bayes_pls_golite062009
  • receptor activity
    		•  1.10676631226741 bayes_pls_golite062009
  • serine-type aminopeptidase activity
    		•  0.964413112640311 bayes_pls_golite062009
  • signal transducer activity
    		•  0.885246794092463 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.885246794092463 bayes_pls_golite062009
  • growth factor activity
    		•  0.848900101748605 bayes_pls_golite062009
  • receptor binding
    		•  0.79054390509229 bayes_pls_golite062009
  • calcium ion binding
    		•  0.753095272942721 bayes_pls_golite062009
  • sodium channel regulator activity
    		•  0.30724450617383 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle