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Protein Overview: AVT3_SCHPO

General Information:
Name(s) found: AVT3_SCHPO [Swiss-Prot]
Description(s) found:
Found 3 descriptions.
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  • Vacuolar amino acid transporter 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=avt3 PE=1 SV=1 [Swiss-Prot]
    • Organism: Schizosaccharomyces pombe 972h-
    Length: 656 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNSQSIKIK KPRSNENFAS GSYSSRRSQQ IHRLSHSPMA EGFHKPKLNI SPSESNLPNN  60
   61 VAENTTDTPV NYGSIRDENH NSRKGKDVTL NSDEAHSENV PSTSEDPDVV RRHLGGQAAD 120
  121 DDNFSSLQLQ GGDMHRQVYR WQQEVDQNKQ IRRGRSRSFS AKVSDPNLHL RSVQDMKQAG 180
  181 GMRRDFLRNR ASSISMSSNA HGNPNFLNRN FIEFLSVYGH FAGEELSEED EDEDTDDFAM 240
  241 PRDVNPSLIH STVPSEQEPL ISRHGRYKLQ TPGNASNGKA VLLLLKSFVG TGVLFLPKAF 300
  301 KLGGLVFSSA TLLIVGVLSH ICFLLLIQTR MKVPGSFGDI GGTLYGPHMR FAILASIVVS 360
  361 QIGFSSAYIS FVASTLQACV KVISTTHREY HLAVFIFIQF LVFVPLSLVR KISKLSATAL 420
  421 IADVFILLGI LYLYFWDVIT LATKGIADVA MFNKTDFSLF IGVAIFTYEG ICLILPIQEQ 480
  481 MAKPKNLPKL LTGVMAAISL LFISIGLLSY AAFGSKVKTV VILNMPESTF TVIIQFLYAI 540
  541 AILLSTPLQL FPAIAIIEQG IFTRSGKRNR KIKWRKNYLR VLIVILAILI SWAGSSRLDL 600
  601 FVSMVGSVCC IPLIYMYPPM LHYKACANNW ILRTLDIFMF TIGAFAMAFT TYMTFF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..262] MSA 18.118997 View MSA. No confident structure predictions are available.
    2 View Details [263..656] PSI-BLAST 3.30103 Cytochrome O ubiquinol oxidase, subunit I

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • hydrogen ion transmembrane transporter activity
    		•  8.31172138116638 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  6.60796554518516 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  6.23387228070882 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  6.12850827083333 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  5.78639467482306 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  5.72454956227707 bayes_pls_golite062009
  • transporter activity
    		•  4.2806100513341 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  4.19885907933483 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.84408202866254 bayes_pls_golite062009
  • heme-copper terminal oxidase activity
    		•  2.43885551987643 bayes_pls_golite062009
  • cytochrome-c oxidase activity
    		•  2.04232192418952 bayes_pls_golite062009
  • oxidoreductase activity, acting on heme group of donors, oxygen as acceptor
    		•  2.04232192418952 bayes_pls_golite062009
  • oxidoreductase activity, acting on heme group of donors
    		•  2.04232192418952 bayes_pls_golite062009
  • catalytic activity
    		•  1.41706486601469 bayes_pls_golite062009
  • binding
    		•  0.876595498770125 bayes_pls_golite062009
  • hydrolase activity
    		•  0.824122124100408 bayes_pls_golite062009
  • protein binding
    		•  0.733559018445359 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.355046044744632 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.349031670056176 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  0.114666275609784 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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