| Protein: | SPAC3H1.09c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 656 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC3H1.09c.
| Description | E-value | Query Range |
Subject Range |
|
|
314.0 | [0..270] | [641..2] |
|
|
314.0 | [0..270] | [641..2] |
|
|
312.0 | [0..276] | [641..1] |
|
|
311.0 | [0..276] | [641..1] |
|
|
311.0 | [0..276] | [641..1] |
|
|
311.0 | [0..276] | [641..1] |
|
|
311.0 | [0..276] | [641..1] |
|
|
310.0 | [0..268] | [641..1] |
|
|
310.0 | [0..276] | [641..1] |
|
|
310.0 | [0..268] | [641..1] |
|
Region A: Residues: [1-262] |
1 11 21 31 41 51
| | | | | |
1 MSNSQSIKIK KPRSNENFAS GSYSSRRSQQ IHRLSHSPMA EGFHKPKLNI SPSESNLPNN 60
61 VAENTTDTPV NYGSIRDENH NSRKGKDVTL NSDEAHSENV PSTSEDPDVV RRHLGGQAAD 120
121 DDNFSSLQLQ GGDMHRQVYR WQQEVDQNKQ IRRGRSRSFS AKVSDPNLHL RSVQDMKQAG 180
181 GMRRDFLRNR ASSISMSSNA HGNPNFLNRN FIEFLSVYGH FAGEELSEED EDEDTDDFAM 240
241 PRDVNPSLIH STVPSEQEPL IS
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [263-656] |
1 11 21 31 41 51
| | | | | |
1 RHGRYKLQTP GNASNGKAVL LLLKSFVGTG VLFLPKAFKL GGLVFSSATL LIVGVLSHIC 60
61 FLLLIQTRMK VPGSFGDIGG TLYGPHMRFA ILASIVVSQI GFSSAYISFV ASTLQACVKV 120
121 ISTTHREYHL AVFIFIQFLV FVPLSLVRKI SKLSATALIA DVFILLGILY LYFWDVITLA 180
181 TKGIADVAMF NKTDFSLFIG VAIFTYEGIC LILPIQEQMA KPKNLPKLLT GVMAAISLLF 240
241 ISIGLLSYAA FGSKVKTVVI LNMPESTFTV IIQFLYAIAI LLSTPLQLFP AIAIIEQGIF 300
301 TRSGKRNRKI KWRKNYLRVL IVILAILISW AGSSRLDLFV SMVGSVCCIP LIYMYPPMLH 360
361 YKACANNWIL RTLDIFMFTI GAFAMAFTTY MTFF
|
| Detection Method: | |
| Confidence: | 3.30103 |
| Match: | 1fftA |
| Description: | Cytochrome O ubiquinol oxidase, subunit I |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| hydrogen ion transmembrane transporter activity | 8.31172138116638 | bayes_pls_golite062009 |
| monovalent inorganic cation transmembrane transporter activity | 6.60796554518516 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 6.23387228070882 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 6.12850827083333 | bayes_pls_golite062009 |
| inorganic cation transmembrane transporter activity | 5.78639467482306 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 5.72454956227707 | bayes_pls_golite062009 |
| transporter activity | 4.2806100513341 | bayes_pls_golite062009 |
| transmembrane transporter activity | 4.19885907933483 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.84408202866254 | bayes_pls_golite062009 |
| heme-copper terminal oxidase activity | 2.43885551987643 | bayes_pls_golite062009 |
| cytochrome-c oxidase activity | 2.04232192418952 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on heme group of donors, oxygen as acceptor | 2.04232192418952 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on heme group of donors | 2.04232192418952 | bayes_pls_golite062009 |
| catalytic activity | 1.41706486601469 | bayes_pls_golite062009 |
| binding | 0.876595498770125 | bayes_pls_golite062009 |
| hydrolase activity | 0.824122124100408 | bayes_pls_golite062009 |
| protein binding | 0.733559018445359 | bayes_pls_golite062009 |
| oxidoreductase activity | 0.355046044744632 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.349031670056176 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 0.114666275609784 | bayes_pls_golite062009 |
