YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: LEUC_SCHPO

General Information:
Name(s) found: LEUC_SCHPO [Swiss-Prot]
Description(s) found:
Found 2 descriptions.
SHOW ALL
  • 3-isopropylmalate dehydratase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=leu2 PE=1 SV=1 [Swiss-Prot]
    • Organism: Schizosaccharomyces pombe 972h-
    Length: 758 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPSVASPKT LYDKVWDSHV VDLQEDGTCL LYIDRHLIHE VTSPQAFEGL RTAGRKVRHP  60
   61 ELALATVDHN IPTDPRKDMK DIASFIHQPD SRTQVLALEN NIKEFGLTYY GMNDRRQGIV 120
  121 HVIGPEQGFT LPGTTLVCGD SHTSTHGAFG ALAFGIGTSE VEHVLATQTI LQRKSKNMRI 180
  181 RVNGKLPEGI ASKDLILHII GVIGTAGGTG SVIEFCGEAI EGLSMEARMS MCNMSIEAGA 240
  241 RAGMIAPDAT TFEYVKNRPL APKGDDWEQA VAYWKTLRSD ENAKYDIEVE INAADVLPTV 300
  301 TWGTSPQDVI PINGNIPDPA HVKDNVRAAS IQRSLEYMGL KPNTSIVSYP IDKVFIGSCT 360
  361 NSRIEDLRLA AAVVKGRKVA ANVKDAMIVP GSGLVKKMAE AEGLDQIFIE AGFDWREAGC 420
  421 SMCLGMNPDQ LKPYERCAST SNRNFEGRQG AKGRTHLVSP AMAAAAAIKG HLCNVREFFG 480
  481 DVSNGSPSII TNKNYDPSHD VEGDIGLSVD DATDAVTDAD GIATNVAGSV SSGSAGIPKF 540
  541 TVVEGIAAPL PMANVDTDKI IPKQFLKTIK RTGLGQFAFY EIRYDADGKE IPDFVLNREP 600
  601 YRHATVLVAH DNFGCGSSRE HAPWALNDFG IRVIIAPSFA DIFFNNCFKN GMLPIPTPIE 660
  661 QVNDMMKAAE NQVKFSVDLV NQTITYGDKQ VKFDVEPFRK HCLVNGLDDI GLTLQKETMI 720
  721 DAFEAAREEN FPWMNIKRSR ARLSPVKSNK QSSSRNDW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..758] PSI-BLAST 1000.0 Structure of an orthorhombic crystal form of human cytosolic aconitase (IRP1)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 3-isopropylmalate dehydratase activity
    		•  11.6597692115322 bayes_pls_golite062009
  • aconitate hydratase activity
    		•  5.86356477922338 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  2.93956285477489 bayes_pls_golite062009
  • catalytic activity
    		•  2.4040324437254 bayes_pls_golite062009
  • carbon-oxygen lyase activity
    		•  2.08349115784849 bayes_pls_golite062009
  • hydro-lyase activity
    		•  2.04845291489052 bayes_pls_golite062009
  • lyase activity
    		•  2.0080619912194 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.67435647648998 bayes_pls_golite062009
  • binding
    		•  1.24981419049889 bayes_pls_golite062009
  • DNA binding
    		•  1.05282906893033 bayes_pls_golite062009
  • structural molecule activity
    		•  0.870913754566634 bayes_pls_golite062009
  • mRNA binding
    		•  0.52321922280827 bayes_pls_golite062009
  • RNA binding
    		•  0.41480744631042 bayes_pls_golite062009
  • iron-sulfur cluster binding
    		•  0.239736179000069 bayes_pls_golite062009
  • metal cluster binding
    		•  0.239736179000069 bayes_pls_golite062009
  • protein binding
    		•  0.232638130896339 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle