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Protein Overview: RET4_MOUSE

General Information:
Name(s) found: RET4_MOUSE [Swiss-Prot]
Description(s) found:
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  • gi|62471575|gb|AAH93529.1| Retinol binding protein 4, plasma [Mus musculus] [NCBI NR]
  • gi|6174963|sp|Q00724.2|RET4_MOUSE RecName: Full=Retinol-binding protein 4; AltName: Full=Plasma retinol-binding protein; Short=PRBP; Short=RBP; Flags: Precursor [NCBI NR]
  • gi|46409045|dbj|BAD16678.1| retinol binding protein 4 [Mus musculus] [NCBI NR]
  • gi|33859612|ref|NP_035385.1| retinol-binding protein 4, plasma isoform 2 precursor [Mus musculus] [NCBI NR]
  • gi|21594162|gb|AAH31809.1| Rbp4 protein [Mus musculus] [NCBI NR]
  • gi|1515450|gb|AAB06955.1| retinol binding protein [Mus musculus] [NCBI NR]
  • gi|12843160|dbj|BAB25881.1| unnamed protein product [Mus musculus] [NCBI NR]
  • (Q00724) Plasma retinol-binding protein precursor (PRBP) (RBP) [Swiss-Prot]
  • Plasma retinol-binding protein precursor - Mus musculus (Mouse) [Swiss-Prot]
  • Retinol-binding protein 4 OS=Mus musculus GN=Rbp4 PE=1 SV=2 [Swiss-Prot]
  • Ensembl_locations(Chr-bp):19-37465156 Plasma retinol-binding protein precursor [hmr_yeast5_DM3-1_pombe.fasta]
  • retinol binding protein 4, plasma; retinol binding protein 4, cellular [HMR_022704-rand.fasta]
  • Plasma retinol-binding protein precursor [ipi.MOUSE.v3.06.fasta]
  • retinol binding protein 4, plasma [Mus musculus]gi|21594162|gb|AAH31809.1| Retinol binding protein 4, plasma [Mus musculus]gi|6174963|sp|Q00724|RETB_MOUSE Plasma retinol-binding protein precursor (PRBP) (RBP)gi|46409045|dbj|BAD16678.1| retinol binding [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10090 Plasma retinol-binding protein precursor [EBI-IPI_mouse_3.17_05-10-2006_con_reversed.fasta]
  • retinol binding protein 4, plasma [Mus musculus] [mouse-NCBI-010306_contam_rand.fasta]
  • Plasma retinol-binding protein precursor (PRBP) (RBP) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • unnamed protein product [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Retinol binding protein 4, plasma [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Rbp4 protein [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • retinol binding protein 4 [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • retinol binding protein [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10090 PLASMA RETINOL-BINDING PROTEIN PRECURSOR [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=10090 Gene_Symbol=Rbp4 Retinol-binding protein 4 [mouse-ipi-250309-contam.fasta]
  • retinol-binding protein 4, plasma isoform 2 precursor [Mus musculus] [NCBI-RefSeq_mouse_na_09-14-2009_con_reversed.fasta]
  • Tax_Id=10090 Gene_Symbol=Rbp4 Plasma retinol-binding protein precursor [ipi.MOUSE_jw_12may08.contam.fasta]
  • Tax_Id=10090 Gene_Symbol=Rbp4 Plasma retinol-binding protein precursor ENSMUSG00000024990 IPI00122429 [IPIxENS.MOUSE_plus_REVERSE.fasta]
  • retinol-binding protein 4 isoform 2 precursor [Mus musculus] [NCBI-RefSeq_mouse_na_05-17-2010_reversed.fasta]
  • IPI:IPI00122429.1|SWISS-PROT:Q00724|TREMBL:Q3TF08|ENSEMBL:ENSMUSP00000025951;ENSMUSP00000107954|REFSEQ:NP_035385 Tax_Id=10090 Gene_Symbol=Rbp4 Retinol-binding protein 4 [ipi.MOUSE.fasta.20090209]
  • Retinol-binding protein 4 OS=Mus musculus GN=Rbp4 [011711_HMR.fasta]
  • Retinol-binding protein 4 OS=Mus musculus GN=Rbp4 PE=2 SV=2 [UniProt_mouse_sprotvarsplic_11-08-2010_reversed.fasta]
  • sp|Q00724|RET4_MOUSE Retinol-binding protein 4 OS=Mus musculus GN=Rbp4 PE=2 SV=2 [uniprot.sptr.mouse.20130102]
    • Organism: Mus musculus
    Length: 201 amino acids

    Gene Ontology:
    Cellular Component: extracellular space [UNKNOWN][IDA]
    extracellular region [IEA]
    Biological Process: embryonic development [IGI]
    negative regulation of cardiac muscle cell proliferation [IMP]
    vagina development [IMP]
    male gonad development [IMP]
    retina development in camera-type eye [IMP]
    uterus development [IMP]
    retinol metabolic process [IGI]
    retinal metabolic process [IMP]
    cardiac muscle tissue development [IMP]
    heart trabecula formation [IMP]
    embryonic organ morphogenesis [IMP]
    heart development [IMP]
    positive regulation of immunoglobulin secretion [IDA]
    response to insulin stimulus [IMP]
    lung development [IMP]
    gluconeogenesis [IMP]
    detection of light stimulus involved in visual perception [IMP]
    female genitalia morphogenesis [IMP]
    urinary bladder development [IMP]
    spermatogenesis [IMP]
    spermatogonial cell division [IMP]
    embryonic skeletal system development [IMP]
    embryonic retina morphogenesis in camera-type eye [IMP]
    transport [IEA]
    eye development [IMP]
    retinol transport [IMP]
    Molecular Function: retinal binding [IEA]
    retinol transporter activity [IMP]
    retinol binding [IDA]
    binding [IEA]
    transporter activity [IEA]
    retinoid binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEWVWALVLL AALGGGSAER DCRVSSFRVK ENFDKARFSG LWYAIAKKDP EGLFLQDNII  60
   61 AEFSVDEKGH MSATAKGRVR LLSNWEVCAD MVGTFTDTED PAKFKMKYWG VASFLQRGND 120
  121 DHWIIDTDYD TFALQYSCRL QNLDGTCADS YSFVFSRDPN GLSPETRRLV RQRQEELCLE 180
  181 RQYRWIEHNG YCQSRPSRNS L

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..201] PSI-BLAST 53.39794 RETINOL-BINDING PROTEIN (RBP) FROM PIG PLASMA

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • retinol transporter activity
    		•  5.36786048169505 bayes_pls_golite062009
  • retinoid binding
    		•  4.98767549087138 bayes_pls_golite062009
  • isoprenoid binding
    		•  4.86005192942793 bayes_pls_golite062009
  • binding
    		•  2.93830472620404 bayes_pls_golite062009
  • vitamin transporter activity
    		•  2.17605178509363 bayes_pls_golite062009
  • prostaglandin-D synthase activity
    		•  2.01260368661398 bayes_pls_golite062009
  • odorant binding
    		•  1.90612877218228 bayes_pls_golite062009
  • protein binding
    		•  1.23450129884619 bayes_pls_golite062009
  • retinol binding
    		•  0.866894491338918 bayes_pls_golite062009
  • lipid binding
    		•  0.688968384039649 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.492856831386131 bayes_pls_golite062009
  • fatty acid binding
    		•  0.457077174463924 bayes_pls_golite062009
  • retinoic acid binding
    		•  0.00104547816575412 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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